DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mGluR and olfcx1

DIOPT Version :9

Sequence 1:NP_001259076.1 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_001335414.4 Gene:olfcx1 / 795275 ZFINID:ZDB-GENE-050419-84 Length:866 Species:Danio rerio


Alignment Length:917 Identity:244/917 - (26%)
Similarity:419/917 - (45%) Gaps:97/917 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TILVVVMVLSWSRVVDLKSPSNTH-------TQDSVSVSLPGDIILGGLFPVHEKGEGAP----- 61
            |:|.:.::|    .:.::..||..       ..|:.|....||::|||:||:|  ....|     
Zfish     7 TLLTLCLLL----YIRVQCQSNNKYKCIYQGDDDTYSFYQGGDLVLGGIFPLH--SSTIPQFFSF 65

  Fly    62 -CGPKVYN------RGVQRLEAMLYAIDRVNNDPNILPGITIGVHILDTCSRDTYALNQSLQFVR 119
             ..||:..      |.::.::.|::|:..:|...::||.:::|.||.|:......::.:||..|.
Zfish    66 TTKPKLIQYKFFTPRALRWMQTMIFAVREINQRQDLLPNLSLGYHIRDSGDDIPVSVKRSLLLVN 130

  Fly   120 ASLNNLDTSGYECADGSSPQLRKNASSGPVFGVIGGSYSSVSLQVANLLRLFHIPQVSPASTAKT 184
            .....  .||..|.|     .||..|  ||  ::|.:.|.||:.|...|..|.||.||..::...
Zfish   131 GQPEK--GSGQSCED-----TRKQPS--PV--IVGEASSGVSMAVLRTLGTFQIPLVSYFASCSC 184

  Fly   185 LSDKTRFDLFARTVPPDTFQSVALVDILKNFNWSYVSTIHSEGSYGEYGIEALHKEATERNVCIA 249
            ||:|..|..|.||:|.|.||..|||.::..|.|:::..|..:..|..:.|:...||:.:.|:|.|
Zfish   185 LSNKREFPAFMRTMPSDLFQIKALVKLVYYFKWTWLGVIGVDTDYARFAIQLFLKESEKYNICPA 249

  Fly   250 VAEKVPSAADDKVFDSIISKLQKKPNARGVVLFTRAEDARRILQAAKRANLSQPFHWIASDGWGK 314
            .....|.|......:.:: |:.|..:||.::.|:.......:|:..:|.|::. ..||||:.|..
Zfish   250 YVHIYPVALTQNTVEELV-KILKSSSARVILNFSVDSYLYGVLKECRRQNVTN-LQWIASEAWAT 312

  Fly   315 QQKLLEGLEDIAEGAITVELQSEIIADFDRYMMQLTPETNQRNPWFAEYWEDTFNCVLT-SLSVK 378
            .:.|.:...|:.:|.:...::...|.....|:..::....|.:|:|.|:||:||:|.|. ||   
Zfish   313 SKVLWDDFGDLLKGTLGFAIRRADIPHLGSYLRSVSSSVAQTSPFFTEFWEETFHCRLNGSL--- 374

  Fly   379 PDTSNSANSTDNKIGVKAKTECDDSYRLSEKVGYEQESKTQFVVDAVYAFAYALHNLHNDRCNTQ 443
             :|.....::.|..........||.|.|...|...:.|..  |..|||..|:|||::  ..|:..
Zfish   375 -NTHVHEEASYNWPACNGNETLDDVYTLYSDVSQLRVSYN--VYKAVYLIAHALHDM--STCDPG 434

  Fly   444 SDQTTETRKHLQSESVWYRKISTDTKSQACPDMANYDGKEFYNNYLLNVSFIDLAGSEVKFDRQG 508
            ...              ::..:..:..|..|....|        |:...:|..| |.||:||:.|
Zfish   435 KGP--------------FKNGTCGSLYQILPWQLLY--------YMKRTNFTTL-GEEVRFDKNG 476

  Fly   509 DGLARYDILNYQRQENSSGYQYKVIG------KWFNGLQLNSETVVWNKETEQPTSACSLPCEVG 567
            |.:|.||::|:||:.:.| .|...:|      |....|.::...::|::..:.|.|.||..|..|
Zfish   477 DPIASYDLMNWQRESDGS-LQLVRVGIYDASFKDDKDLVIDESVIMWHRGDKAPESLCSKSCLPG 540

  Fly   568 MIK-KQQG-DTCCWICDSCESFEY--VYDEFTCKDCGPGLWPYADKLSCYALDIQYMKWNSLFAL 628
            ..| :|:| ..||:.|.||...|.  ..|...|..|....||...:..|....::::.:.....:
Zfish   541 SRKARQKGKPVCCFDCISCAEGEISNQTDSIDCLTCSKDTWPNQSQDQCIPKTLEFLSFQEPLGI 605

  Fly   629 IPMAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGILVCYCNTFALIAKPTIGSCVL 693
            |....:..|......|:.:|.....||::|.:..|||:.||..:..|:......:.|||...|.:
Zfish   606 ILWVFSALGACAALAVLCVFVMYRTTPVIRGNNIELSFLLLLFLCACFLIGLTFLGKPTDWLCQI 670

  Fly   694 QRFGIGVGFSIIYSALLTKTNRISRIFHSASKSAQRLKYISP---QSQVVITTSLIAIQVLITMI 755
            :....|:.|::..|.:|.||..:...|.:.......:|:..|   :|.|::.|   .:|.||.:|
Zfish   671 RYPAFGISFTLCISCILAKTVVVLMAFRATIPGNNVMKWFGPVKQRSSVILCT---CVQALICII 732

  Fly   756 WMVVEPP----GTRFYYPDRREVILKCKI-QDMSFLFSQLYNMILITICTIYAIKTRKIPENFNE 815
            |:..:||    .::|.   ...:|::|.: .::.|.....|...|.::|...|...||:|:||||
Zfish   733 WLTTKPPLASYNSKFL---SATIIVECSVGSEVGFWCVLGYIGFLSSLCFFLAFLARKLPDNFNE 794

  Fly   816 SKFIGFTMYTTCIIWLAFVPIYFGTGNSYEVQTTTLCISISLSASVALVCLYSPKVYILVFHPDK 880
            :|||.|:|.....:|:.|:|:|..:...|.|....  .:|..||...|:|:::||.|:::..|::
Zfish   795 AKFITFSMLIFFAVWITFIPVYVSSSGKYMVAVHV--FAILASAFGLLMCIFAPKCYVVLLKPER 857

  Fly   881 NVRKLTM 887
            |.:|..|
Zfish   858 NDKKSMM 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_001259076.1 Periplasmic_Binding_Protein_Type_1 43..542 CDD:299141 141/517 (27%)
ANF_receptor 72..518 CDD:279440 121/446 (27%)
NCD3G 557..604 CDD:284890 17/50 (34%)
7tm_3 638..873 CDD:278433 67/242 (28%)
olfcx1XP_001335414.4 Periplasmic_Binding_Protein_Type_1 44..522 CDD:324556 141/524 (27%)
NCD3G 530..582 CDD:311495 17/51 (33%)
7tmC_V2R_pheromone 602..853 CDD:320410 70/258 (27%)
TM helix 1 602..627 CDD:320410 4/24 (17%)
TM helix 2 639..660 CDD:320410 6/20 (30%)
TM helix 3 669..693 CDD:320410 6/23 (26%)
TM helix 4 717..733 CDD:320410 6/18 (33%)
TM helix 5 760..786 CDD:320410 5/25 (20%)
TM helix 6 794..817 CDD:320410 9/22 (41%)
TM helix 7 822..847 CDD:320410 7/26 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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