DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and Vom2r9

DIOPT Version :10

Sequence 1:NP_524639.2 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001092935.1 Gene:Vom2r9 / 685666 RGDID:1591347 Length:866 Species:Rattus norvegicus


Alignment Length:916 Identity:209/916 - (22%)
Similarity:380/916 - (41%) Gaps:156/916 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GDIILGGLFPVH------EKGEGAPCGPKVYN-----------RGVQRLEAMLYAIDRVNNDPNI 90
            |::::|..||:|      :...|     .|.|           ...|.:.|:::||:.:|.:|::
  Rat    41 GNVVIGAFFPLHTFYTANKTAYG-----NVMNYYKDFYLKYKFNNYQFVLALVFAIEEINKNPHL 100

  Fly    91 LPGITIGVHILDTCSRDTYALNQSLQFVRASLNNLDTSGYECADGSSPQLRKNASSGPVFGVIGG 155
            |..|::|.|:.:....:...|..:|.::....|.:  ..|.|        |.|..|.   ..:.|
  Rat   101 LSNISLGFHVYNVPYTEKNTLMSTLIWLTGQRNFM--PNYNC--------RMNRMSA---AALTG 152

  Fly   156 SYSSVSLQVANLLRLFHIPQV-------SPASTAKTLSDKTRFDLFARTVPPDTFQSVALVDILK 213
            :..:.|.|:..||:|:..|||       .|:.  ..|||:.:|....:..|.||..|:|:|.::.
  Rat   153 TSWATSAQIGTLLQLYKFPQVREIILTFGPSD--PILSDRGQFSSLYQMAPNDTTLSLAMVSLML 215

  Fly   214 NFNWSYVSTIHSEGSYGEYGIEALHKEATERNVCIAVAEKVPS--AADDKVFDSIISKLQKKPNA 276
            :||||:|..:..:...|.:.:..|.:|.....:|:|:.|.:|.  .:....|...:.|:|:. .|
  Rat   216 HFNWSWVGLLLIDDHKGTHILSHLREEMDRSKICLALVEMIPVTWTSFSYNFWKNLKKIQES-LA 279

  Fly   277 RGVVLFTRAEDARRILQAAKRANLSQPF----HWIASDGWGKQQKLLEGLEDIAEGAITVELQSE 337
            ...:::...:..:.::.     ||.|..    .||.:..|...::....|.|...|::......|
  Rat   280 NVFIIYGDIDSLQGLMD-----NLGQQLITWKVWIMNSQWDSTKQADYFLLDSFHGSLIFSHHHE 339

  Fly   338 IIADFDRYMMQLTPETNQRNPWFAEYWEDTFNCVLTSL------SVKPDTSNSANSTDNKIGVKA 396
            ...:|..::.::.|.....:|:..:.|...|||..:..      :.:|:.|.....|.    :..
  Rat   340 ESFEFSNFIRKVNPYKYPEDPYLPKLWYALFNCSFSKFDCQLLENCQPNASLELFPTT----IID 400

  Fly   397 KTECDDSYRLSEKVGYEQESKTQFVVDAVYAFAYALHNLHNDRCNTQSDQTTETRKHLQSESV-- 459
            .:..::||.               :..:|||.|:.|..:...:|..||        ||:.|.:  
  Rat   401 MSMSEESYN---------------IYTSVYAVAHTLQEMSLQQCQMQS--------HLKGEKMVF 442

  Fly   460 --WYRKISTDTKSQACPDMANYDGKEFYNNYLLNVSFIDLAGSEVKFDRQGDGLARYDILNYQRQ 522
              |.                       .:::|..:.    .|..:..:.:...:..|||||:...
  Rat   443 FPWQ-----------------------LHHFLRKIH----EGDHMSLEWKWRFIEEYDILNFWNF 480

  Fly   523 ENSSGYQYKVIGKWF------NGLQLNSETVVW-NKETEQPTSACSLPCEVGMIKKQQGD--TCC 578
            ....|.:.|| |.:.      ..|.|:...:.| .|.|:.|.|||...|..|..|..|..  .||
  Rat   481 PKGLGLKVKV-GTFSLDAPQGEQLSLSEHMIQWPTKFTQIPQSACYTSCWPGFRKATQKGRAVCC 544

  Fly   579 WICDSC--ESFEYVYDEFTCKDCGPGLWPYADKLSCYALDIQYMKWNSLFALIPMAIAIFGIALT 641
            :.|..|  .......|...|..|....:|..:|.:|....:.::::|....::.:.||:...|||
  Rat   545 YDCIPCLDNEISNETDVDQCVKCPETHFPNTEKNNCLQKSMSFLEYNDNLGMVLITIALCFSALT 609

  Fly   642 SIVIVLFAKNHDTPLVRASGRELSYTLLFGILVCYCNTFALIAKPTIGSCVLQRFGIGVGFSIIY 706
            ..|:.:|.|..|||:|:|:.|.|||.||..::||:..:...|..|...:|::|:...|:.|::..
  Rat   610 LAVLGVFVKYRDTPIVKANNRTLSYILLMTLVVCFLCSLLFIGHPNTATCLMQQTTFGIVFTVAL 674

  Fly   707 SALLTKTNRISRIF-HSASKSAQRLKYISPQSQVVITTSLIAIQVLITMIWMVVEPPGTRFY--- 767
            |.:|.|...:...| .:......|...:|.....||....: ||:::..|::...||   |.   
  Rat   675 STVLAKVITVVMAFKFTIPGRITRWLMVSRAPNYVIPICTL-IQIVLCGIYLGTSPP---FLDQD 735

  Fly   768 -YPDRREVILKC-KIQDMSFLFSQLYNMILITIC------TIYAIKTRKIPENFNESKFIGFTMY 824
             |.:...:::.| |..|:      :::.||..:|      .:.|..:|.:|:.|||||.:.|:|.
  Rat   736 PYSEHDHILIVCNKGSDV------VFHCILGYLCFLALGSCVMAFLSRNLPDTFNESKLLSFSMQ 794

  Fly   825 TTCIIWLAFVPIYFGTGNSYEVQTTTLCISISLSASVALVCLYSPKVYILVFHPDKNVRKLTMNS 889
            ....:|:.|:|:|..|..  :|.......||..|::..|..:::||.||::..||:|......|:
  Rat   795 VFLCVWVTFLPVYHSTKG--KVMVAMQVSSILASSAGILGFIFAPKCYIILLRPDQNSLHHIRNT 857

  Fly   890 TVYRRS 895
            ...||:
  Rat   858 AYTRRN 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_524639.2 PBP1_mGluR_groupII 39..542 CDD:380598 108/544 (20%)
NCD3G 556..605 CDD:462210 15/52 (29%)
7tmC_mGluRs_group2_3 625..876 CDD:320600 72/262 (27%)
TM helix 1 625..650 CDD:320600 7/24 (29%)
TM helix 2 662..683 CDD:320600 8/20 (40%)
TM helix 3 692..716 CDD:320600 6/23 (26%)
TM helix 4 738..758 CDD:320600 5/19 (26%)
TM helix 5 781..807 CDD:320600 5/31 (16%)
TM helix 6 815..838 CDD:320600 8/22 (36%)
TM helix 7 845..870 CDD:320600 5/24 (21%)
Vom2r9NP_001092935.1 PBP1_pheromone_receptor 44..512 CDD:380588 108/548 (20%)
NCD3G 520..573 CDD:462210 15/52 (29%)
7tmC_V2R_pheromone 594..844 CDD:320410 72/261 (28%)
TM helix 1 594..618 CDD:320410 7/23 (30%)
TM helix 2 630..651 CDD:320410 8/20 (40%)
TM helix 3 660..684 CDD:320410 6/23 (26%)
TM helix 4 708..724 CDD:320410 4/16 (25%)
TM helix 5 751..777 CDD:320410 5/31 (16%)
TM helix 6 785..808 CDD:320410 8/22 (36%)
TM helix 7 813..838 CDD:320410 5/24 (21%)

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