DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and Vmn2r33

DIOPT Version :10

Sequence 1:NP_524639.2 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001098535.2 Gene:Vmn2r33 / 624512 MGIID:3757694 Length:861 Species:Mus musculus


Alignment Length:865 Identity:187/865 - (21%)
Similarity:358/865 - (41%) Gaps:139/865 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 AMLYAIDRVNNDPNILPGITIGV-HILDTCSRDT-----YALNQSLQFVRASLNNLDTSGYECAD 134
            |:.:|:|.:|.:|::||.:::.: :.|..|...|     |..::.        |......|.|  
Mouse    77 ALAFAMDEINRNPDLLPNMSLIIRYTLGRCDGKTVIPTPYLFHKK--------NQSPIPNYFC-- 131

  Fly   135 GSSPQLRKNASSGPVFGVIGGSYSSVSLQVANLLRLFHIPQV-----SPASTAKTLSDKTRFDLF 194
             :...:.....:||.:|        ||:.....|..|..|::     .|.|:  ..||..::...
Mouse   132 -NEETMCSFLLTGPNWG--------VSISFWKYLDSFLSPRILQLTYGPFSS--IFSDDEQYPYL 185

  Fly   195 ARTVPPDTFQSVALVDILKNFNWSYVSTIHSEGSYGEYGIEALHKEATERNVCIAVAEKVPSAAD 259
            .:..|.||..::|:|..:..|||:::..:..:...|...:..|.|:...:.:|.|..:.:  :.|
Mouse   186 YQMAPKDTSLALAMVSFILYFNWNWIGLVIPDDDQGNQFLLELKKQRENKEICFAFVKMI--SVD 248

  Fly   260 DKVFDSIISKLQKK---PNARGVVLFTRAEDARRILQAAKRANLSQPFHWIASDGWGKQQKLLEG 321
            |..|:.......|:   .::..::::....|...::.......:.|.. ||.:..|.......:.
Mouse   249 DISFEHKTEMYYKQIVMSSSNVIIIYEETIDFIDLIFRMWEPPVLQRI-WITTKQWNFPTSKRDI 312

  Fly   322 LEDIAEGAITVELQSEIIADFDRYMMQLTPETNQRNPWFAEYWEDTFNCVLTSLSVKPDTSN-SA 385
            ......|::|.......|:.|..::          ..||....:|.:       .|.|:... ..
Mouse   313 THGTFYGSLTFLPHHGGISGFKDFV----------QTWFHLRSKDLY-------LVMPEWKYFKY 360

  Fly   386 NSTDNKIGVKAKTECDDSY--RLSEKVGYEQESKTQFVVDAVYAFAYALHNLHNDRCNTQS-DQT 447
            .|:.:|..:......|.|:  .:.:|........:..:.:||:|.|:|||.::..:.:.|: |..
Mouse   361 ESSASKCKILKNNSSDASFDWLMEQKFDMAFSESSHNIYNAVHAIAHALHEMNLQQVDNQAIDNG 425

  Fly   448 TETRKHLQSESVWYRKISTDTKSQACPDMANYDGKEFYNNYLLNVSFIDLAGSEVKFDRQGDGLA 512
            .....|                   |..:         |::|..:.|.:..|::|...::.....
Mouse   426 KGASSH-------------------CLKV---------NSFLRKIHFTNPLGNKVIMKQRVIMQE 462

  Fly   513 RYDILNYQRQENSSGYQYKVIGK---WFN---GLQLNSETV-VWNKETEQPTSACSLPCEVGM-- 568
            .|||.::.......|.:.| :||   :|:   ...|..:.: |.....:.|:|.||.....|.  
Mouse   463 EYDIFHFGNLSQHLGIKVK-LGKFSPYFSHGRNFHLYVDMLE
VATGSRKMPSSVCSAEGSPGFRR 526

  Fly   569 IKKQQGDTCCWICDSCE----SFEYVYDEFTCKDCGPGLWPYADKLSCYALDIQYMKWNSLFALI 629
            :.|:....||:||..|.    |.|...|:  |.:|....:...::..|....:.::.:..   .:
Mouse   527 LWKEGMAACCFICSPCPENEISNETNMDQ--CVNCPEYQYA
NTEQNKCIQKGVTFLSYED---PL 586

  Fly   630 PMAIAIFGI---ALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGILVCYCNTFALIAKPTIGSC 691
            .||:|:...   |.|::|:.:|.|:||||:|:|:.|.|||.||..::.|:..:|..|..|...:|
Mouse   587 GMALALMAFCFSAFTAVVLCVFVKHHDTPIVKANNRILSYILLISLMSCFLCSFFFIGHPNRATC 651

  Fly   692 VLQRFGIGVGFSIIYSALLTKTNRISRIFHSASKSAQRLK---------YISPQSQVVITTSLIA 747
            |||:...|:.|::..|.:|.||..:...| ..:...:||:         ||.|...:        
Mouse   652 VLQQITFGIVFTVAVSTVLAKTVTVVLAF-KVTDPGRRLRNFLVSGTPNYIIPICSL-------- 707

  Fly   748 IQVLITMIWMVVEPPGTRFYYPDRR----EVILKCKIQDMSFLFSQLYNMILITICTI-YAIKTR 807
            :|.::..||:.|.||   |...|..    .:|:.|....::..:..|..:..:.:.:. .|...:
Mouse   708 LQCVLCAIWLEVSPP---FVDIDEHSQHGHIIIVCNKGSVTAFYCVLGYLACLALGSFSLAFLAK 769

  Fly   808 KIPENFNESKFIGFTMYTTCIIWLAFVPIYFGTGNSYEVQTTTLCISISLSASVALVCLYSPKVY 872
            .:|:.|||:||:.|:|.....:|:.|:|:|..|..  :|.......||..|::..|.|:::||:|
Mouse   770 NLPDTFNEAKFLTFSMLVFFSVWVTFLPVYHSTKG--KVMVAVEIFSILASSAGMLGCIFAPKIY 832

  Fly   873 ILVFHPDKN-VRKLTM-NST 890
            |::..||:| .:|:.: |||
Mouse   833 IILMRPDRNSTQKIKVRNST 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_524639.2 PBP1_mGluR_groupII 39..542 CDD:380598 86/489 (18%)
NCD3G 556..605 CDD:462210 16/54 (30%)
7tmC_mGluRs_group2_3 625..876 CDD:320600 75/267 (28%)
TM helix 1 625..650 CDD:320600 7/27 (26%)
TM helix 2 662..683 CDD:320600 8/20 (40%)
TM helix 3 692..716 CDD:320600 9/23 (39%)
TM helix 4 738..758 CDD:320600 3/19 (16%)
TM helix 5 781..807 CDD:320600 2/26 (8%)
TM helix 6 815..838 CDD:320600 8/22 (36%)
TM helix 7 845..870 CDD:320600 6/24 (25%)
Vmn2r33NP_001098535.2 PBP1_pheromone_receptor 43..503 CDD:380588 87/495 (18%)
NCD3G 512..565 CDD:462210 16/54 (30%)
7tmC_V2R_pheromone 585..836 CDD:320410 75/264 (28%)
TM helix 1 585..610 CDD:320410 7/24 (29%)
TM helix 2 622..643 CDD:320410 8/20 (40%)
TM helix 3 652..676 CDD:320410 9/23 (39%)
TM helix 4 700..716 CDD:320410 4/23 (17%)
TM helix 5 743..769 CDD:320410 2/25 (8%)
TM helix 6 777..800 CDD:320410 8/22 (36%)
TM helix 7 805..830 CDD:320410 6/24 (25%)

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