DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and Grm8

DIOPT Version :10

Sequence 1:NP_524639.2 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_071538.1 Gene:Grm8 / 60590 RGDID:619858 Length:908 Species:Rattus norvegicus


Alignment Length:922 Identity:431/922 - (46%)
Similarity:562/922 - (60%) Gaps:76/922 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 THTQD-SVSVSLPGDIILGGLFPVHEKGE-GAPCGPKVYNRGVQRLEAMLYAIDRVNNDPNILPG 93
            ||:|: :.|:.:.||||||||||||.||| |.|||.....:|:.||||||||||::|.||::|..
  Rat    31 THSQEYAHSIRVDGDIILGGLFPVHAKGERGVPCGELKKEKGIHRLEAMLYAIDQINKDPDLLSN 95

  Fly    94 ITIGVHILDTCSRDTYALNQSLQFVRASLNNLDTSGYECADGSSPQLRKNASSGPVFGVIGGSYS 158
            ||:||.||||||||||||.|||.||:|.:.. |.|..:||:|..|...|   ...:.||||.:.|
  Rat    96 ITLGVRILDTCSRDTYALEQSLTFVQALIEK-DASDVKCANGDPPIFTK---PDKISGVIGAAAS 156

  Fly   159 SVSLQVANLLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQSVALVDILKNFNWSYVSTI 223
            |||:.|||:||||.|||:|.||||..|||.||:|.|:|.||||::|:.|:|||:....|:||||:
  Rat   157 SVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMVDIVTALGWNYVSTL 221

  Fly   224 HSEGSYGEYGIEALHKEATE-RNVCIAVAEKVPSAADDKVFDSIISKLQKKPNARGVVLFTRAED 287
            .|||:|||.|:||..:.:.| ..||||.::|:|.......|:.||.:|.:.||||.|::|...:|
  Rat   222 ASEGNYGESGVEAFTQISREIGGVCIAQSQKIPREPRPGEFEKIIKRLLETPNARAVIMFANEDD 286

  Fly   288 ARRILQAAKRANLSQPFHWIASDGWGKQQKLLEGLEDIAEGAITVELQSEIIADFDRYMMQLTPE 352
            .||||:|||:.|.|..|.||.||.||.:...:...|:|||||:|:..:...|..||||....|..
  Rat   287 IRRILEAAKKLNQSGHFLWIGSDSWGSKIAPVYQQEEIAEGAVTILPKRASIDGFDRYFRSRTLA 351

  Fly   353 TNQRNPWFAEYWEDTFNCVLTSLSVKPDTSNSANSTDNKIGVKAKTECDDSYRLSEKVGYEQESK 417
            .|:||.||||:||:.|.|.|.|       ....||...|        |....|::....||||.|
  Rat   352 NNRRNVWFAEFWEENFGCKLGS-------HGKRNSHIKK--------CTGLERIARDSSYEQEGK 401

  Fly   418 TQFVVDAVYAFAYALHNLHNDRCNTQSDQTTETRKHLQSESVWYRKISTDTKSQACPDMANYDGK 482
            .|||:||||:.||||||:|.:||.....                          .||.|...|||
  Rat   402 VQFVIDAVYSMAYALHNMHKERCPGYIG--------------------------LCPRMVTIDGK 440

  Fly   483 EFYNNYLLNVSFIDLAGSEVKFDRQGDGLARYDILNYQRQENSSGYQYKVIGKWFNGLQLNSETV 547
            |.. .|:..|:|...||:.|.|:..||...||||..|  |.|:...:||:||.|.|.|.|..|.:
  Rat   441 ELL-GYIRAVNFNGSAGTPVTFNENGDAPGRYDIFQY--QINNKSTEYKIIGHWTNQLHLKVEDM 502

  Fly   548 VW-NKETEQPTSACSLPCEVGMIKKQ-QGDTCCWICDSCESFEYVYDEFTCKDCGPGLWPYADKL 610
            .| |:|...|.|.|||||:.|..||. :|..|||.|:.||.:.|..||.:|:.|.....|..::.
  Rat   503 QWANREHTHPASVCSLPCKPGERKKTVKGVPCCWHCERCEGYNYQVDELSCELCPLDQRPNINRT 567

  Fly   611 SCYALDIQYMKWNSLFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGILVC 675
            .|..:.|..::|:|.:|::|:.|||.||..|:.|||.|.:.:|||:||||||||||.||.||.:|
  Rat   568 GCQRIPIIKLEWHSPWAVVPVFIAILGIIATTFVIVTFVRYNDTPIVRASGRELSYVLLTGIFLC 632

  Fly   676 YCNTFALIAKPTIGSCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSASKSAQRLKYISPQSQVV 740
            |..||.:||.|....|..:|..:|:|....|:|||||||||.|||....||....|:|||.||:|
  Rat   633 YSITFLMIAAPDTIICSFRRIFLGLGMCFSYAALLTKTNRIHRIFEQGKKSVTAPKFISPASQLV 697

  Fly   741 ITTSLIAIQVLITMIWMVVEPPGTRFYYPDRREV-------ILKCKIQDMSFLFSQLYNMILITI 798
            ||.|||::|:|...:|.||:||.|...|.::|.:       :|||.|.|:|.:.|..|:::|:..
  Rat   698 ITFSLISVQLLGVFVWFVVDPPHTIIDYGEQRTLDPENARGVLKCDISDLSLICSLGYSILLMVT 762

  Fly   799 CTIYAIKTRKIPENFNESKFIGFTMYTTCIIWLAFVPIYFGTGNSYE---VQTTTLCISISLSAS 860
            ||:||||||.:||.|||:|.|||||||||||||||:||:|||..|.|   :|||||.:|:|||||
  Rat   763 CTVYAIKTRGVPETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQSAEKMYIQTTTLTVSMSLSAS 827

  Fly   861 VALVCLYSPKVYILVFHPDKNVRKLTMNSTVYRRSAAAVAQGAPTSS-----GYSRTHAPGTSAL 920
            |:|..||.|||||::|||::||:|       .:||..||...|...|     |..|.:....|.|
  Rat   828 VSLGMLYMPKVYIIIFHPEQNVQK-------RKRSFKAVVTAATMQSKLIQKGNDRPNGEVKSEL 885

  Fly   921 TGGAVGTNASSS 932
            . .::.||.||:
  Rat   886 C-ESLETNTSST 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_524639.2 PBP1_mGluR_groupII 39..542 CDD:380598 233/504 (46%)
NCD3G 556..605 CDD:462210 22/49 (45%)
7tmC_mGluRs_group2_3 625..876 CDD:320600 142/260 (55%)
TM helix 1 625..650 CDD:320600 12/24 (50%)
TM helix 2 662..683 CDD:320600 13/20 (65%)
TM helix 3 692..716 CDD:320600 11/23 (48%)
TM helix 4 738..758 CDD:320600 10/19 (53%)
TM helix 5 781..807 CDD:320600 11/25 (44%)
TM helix 6 815..838 CDD:320600 19/22 (86%)
TM helix 7 845..870 CDD:320600 16/27 (59%)
Grm8NP_071538.1 PBP1_mGluR_groupIII 40..504 CDD:380599 235/511 (46%)
NCD3G 512..562 CDD:462210 22/49 (45%)
7tmC_mGluR8 582..892 CDD:320570 158/317 (50%)
TM helix 1 582..607 CDD:320570 12/24 (50%)
TM helix 2 619..640 CDD:320570 13/20 (65%)
TM helix 3 649..673 CDD:320570 11/23 (48%)
TM helix 4 695..715 CDD:320570 10/19 (53%)
TM helix 5 745..771 CDD:320570 11/25 (44%)
TM helix 6 779..802 CDD:320570 19/22 (86%)
TM helix 7 812..837 CDD:320570 15/24 (63%)

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