DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and olfcs2

DIOPT Version :10

Sequence 1:NP_524639.2 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001094425.1 Gene:olfcs2 / 570726 ZFINID:ZDB-GENE-060503-238 Length:856 Species:Danio rerio


Alignment Length:897 Identity:248/897 - (27%)
Similarity:406/897 - (45%) Gaps:117/897 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SVSVSLPGDIILGGLFPVHEKGEGAPCGPKVYN-------------RGVQRLEAMLYAIDRVNND 87
            |.|:...||:|:||||||:.:   ||.....:.             |..:.|:.||:.::.:|.|
Zfish    30 SESLYKEGDVIIGGLFPVYNE---APVPNHAFTQIQNRSRCQGVDLRSYRWLKTMLFTVEEINRD 91

  Fly    88 PNILPGITIGVHILDTCSRDTYALNQSLQFVRASLNNLDTSGYECADGSSPQLRKNASSGPVFGV 152
            |.:||.|.:|..:.|||..::..|:.:|..:......:  |..||.  .:|::       ||  :
Zfish    92 PFLLPNIILGYLVADTCLAESTTLSAALAIMTGQEETV--SDTECI--VAPRV-------PV--I 143

  Fly   153 IGGSYSSVSLQVANLLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQSVALVDILKNFNW 217
            :|.:.||.|:.||:.|.:|.||.||..::...|.|..||..|.||||.|.||:.|:..:|...:|
Zfish   144 VGDARSSASIGVADTLGVFDIPMVSYFASCACLGDNHRFHTFLRTVPSDAFQAKAMARLLHLLDW 208

  Fly   218 SYVSTIHSEGSYGEYGIEALHKEATERNVCIAVAEKVPSAADDKVFDSIISKLQKKPNARGVVLF 282
            ::|..:..:..||:.|::.|.||.....||:...|.:|.:...:.....:..:|.. .|..||.|
Zfish   209 TWVGVVAGDDEYGKSGVQLLLKELEHVGVCVDYLEFIPKSHSQRRIRRTVETIQSS-TAHVVVTF 272

  Fly   283 TRAEDARRILQAAKRANLSQPFHWIASDGWGKQQKLLEGLE-DIAEGAITVELQSEIIADFDRYM 346
            ..|.|...:.:.....|::.. .|||::.|....:.|:... .:..|.:...|....|.....|:
Zfish   273 AIAPDIEVLFKEVVVQNVTNR-QWIATEAWSTSVQFLDPASIPLLAGTLGFALHRADIEGLGAYL 336

  Fly   347 MQLTPETNQRNPWFAEYWEDTFNCVLTSLSVKPDTSNSANSTDNKIGVKAKTECDDSYRLSEKVG 411
            .||.|......|:..:.||:.|.|     |:..|...|..          :.:|..|..:....|
Zfish   337 SQLNPAKQSNEPFVKDVWEEIFGC-----SLAQDWQPSFK----------RPKCTGSENVEIHGG 386

  Fly   412 -YEQESK---TQFVVDAVYAFAYALHNL---HNDRCNTQSDQTTETRKHLQSESVWYRKISTDTK 469
             |...|:   |..|..||||.|||:||:   ...|...::.|                       
Zfish   387 IYTDVSQLRVTYNVYKAVYAIAYAIHNMIACQPGRGPFENGQ----------------------- 428

  Fly   470 SQACPDMANYDGKEFYNNYLLNVSFIDLAGSEVKFDRQGDGLARYDILNYQRQENSSGYQYKVIG 534
               |||:.....::.. :||..|:|....|..|.|:..|:..|.|||:|:...| |....:..:|
Zfish   429 ---CPDVNQIKPRQLL-HYLNAVNFTTPVGELVYFEDNGEPSASYDIMNWHVDE-SGAVNFVQVG 488

  Fly   535 KW--FNG----LQLNSETVVWNK--ETEQPTSACSLPCEVGMIKK-QQGDT-CCWICDSCESFEY 589
            ::  .||    |.:|.:.|||..  ..:.|.|.||:.|..|..|. |:|.. ||:.|..|.:.|.
Zfish   489 QFDAANGPGQELNINIKKVVWGGGWSDQVPVSVCSVSCLPGTRKSVQKGKAICCFDCLPCAAGEI 553

  Fly   590 --VYDEFTCKDCGPGLWPYADKLSCYALDIQYMKWNSLFALIPMAIAIFGIALTSIVIVLFAKNH 652
              :.|...|..|....|...::..|....::::.......::...:::.|..||:.|:..|..:.
Zfish   554 SNLTDSTKCIRCPEKFWSNVERTKCVPKIVEFLSLQDTMGIVLTVLSVTGATLTTTVLATFFHHR 618

  Fly   653 DTPLVRASGRELSYTLLFGILVCYCNTFALIAKPTIGSCVLQRFGIGVGFSIIYSALLTKTNRIS 717
            |||||||:..|||:.||..:.:|:......|.:|...:|:|:....||.|.|..:.:|:||..:.
Zfish   619 DTPLVRANNSELSFMLLVSLTLCFLCALVFIGRPATWNCMLRHTLFGVSFVICIACILSKTVVVL 683

  Fly   718 RIFHSASKSAQRLKYISPQSQ---VVITTSLIAIQVLITMIWMVVEPPGTRFYYPDRR------- 772
            ..|.:....:..::|..|..|   :::.|   .:||:|.::|:::.||     .|..|       
Zfish   684 VAFQATLPGSNLMQYFGPIQQRAGILVCT---MVQVVICLLWLLLAPP-----LPTERAGGEFGA 740

  Fly   773 EVILKCKIQD-MSFLFSQLYNMILITICTIYAIKTRKIPENFNESKFIGFTMYTTCIIWLAFVPI 836
            .|||:|.:.. :.|.....|..:|..:|.:.|...||:|::|||:|||.|:|...|.:|:.|||.
Zfish   741 RVILQCTVGSVVGFALVLGYIGLLAVVCFLLAFFARKLPDSFNEAKFITFSMLIFCTVWIVFVPA 805

  Fly   837 YFGTGNSYEVQTTTLCISISLSASVA-LVCLYSPKVYILVFHPDKNVRKLTM 887
            |..:...|.|......|   |::|.. |:|:::||.||::..|:||.:|..|
Zfish   806 YVSSPGKYTVAVEIFAI---LASSYGLLLCIFTPKCYIILLKPEKNTKKNMM 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_524639.2 PBP1_mGluR_groupII 39..542 CDD:380598 139/529 (26%)
NCD3G 556..605 CDD:462210 17/52 (33%)
7tmC_mGluRs_group2_3 625..876 CDD:320600 79/262 (30%)
TM helix 1 625..650 CDD:320600 5/24 (21%)
TM helix 2 662..683 CDD:320600 6/20 (30%)
TM helix 3 692..716 CDD:320600 8/23 (35%)
TM helix 4 738..758 CDD:320600 6/22 (27%)
TM helix 5 781..807 CDD:320600 5/26 (19%)
TM helix 6 815..838 CDD:320600 11/22 (50%)
TM helix 7 845..870 CDD:320600 6/25 (24%)
olfcs2NP_001094425.1 PBP1_CaSR 40..509 CDD:380587 139/529 (26%)
NCD3G 518..571 CDD:462210 17/52 (33%)
7tmC_V2R_pheromone 591..843 CDD:320410 79/262 (30%)
TM helix 1 591..616 CDD:320410 5/24 (21%)
TM helix 2 628..649 CDD:320410 6/20 (30%)
TM helix 3 658..682 CDD:320410 8/23 (35%)
TM helix 4 706..722 CDD:320410 4/18 (22%)
TM helix 5 750..776 CDD:320410 5/25 (20%)
TM helix 6 784..807 CDD:320410 11/22 (50%)
TM helix 7 812..837 CDD:320410 7/27 (26%)

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