DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and grm8b

DIOPT Version :9

Sequence 1:NP_001259076.1 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001274468.1 Gene:grm8b / 569768 ZFINID:ZDB-GENE-110421-3 Length:907 Species:Danio rerio


Alignment Length:935 Identity:414/935 - (44%)
Similarity:553/935 - (59%) Gaps:93/935 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SPSNTHTQDSVSVSLPGDIILGGLFPVHEKGE-GAPCGPKVYNRGVQRLEAMLYAIDRVNNDPNI 90
            :|...|     |:.|.||||||||||||.:|| |||||.....:|:.||||||:|||.:|.||::
Zfish    32 APEYAH-----SIRLDGDIILGGLFPVHARGERGAPCGELKKEKGIHRLEAMLFAIDLINKDPDL 91

  Fly    91 LPGITIGVHILDTCSRDTYALNQSLQFVRASLNNLDTSGYECADGSSPQLRKNASSGPVFGVIGG 155
            ||.:|:|..||||||||||||.|||.||:|.:.. |::...||.|..|..   |....:.||||.
Zfish    92 LPNVTLGARILDTCSRDTYALEQSLTFVQALIER-DSTDVRCASGEQPIF---AKPDKIIGVIGA 152

  Fly   156 SYSSVSLQVANLLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQSVALVDILKNFNWSYV 220
            :.||||:.|||:||||.|||:|.||||..|||.||:|.|:|.||||::|:.|::||:....|:||
Zfish   153 AASSVSIMVANILRLFKIPQISYASTAPELSDNTRYDFFSRVVPPDSYQAQAMLDIVTAMGWNYV 217

  Fly   221 STIHSEGSYGEYGIEALHKEATER-NVCIAVAEKVPSAADDKVFDSIISKLQKKPNARGVVLFTR 284
            ||:.|||:|||.|:||..:.:.|. .||||.:.|:|.......||.||.:|.:.|:||.:|:|..
Zfish   218 STLASEGNYGESGVEAFVQISRETGGVCIAQSLKIPREPRPGEFDKIILRLLETPSARAIVMFAN 282

  Fly   285 AEDARRILQAAKRANLSQPFHWIASDGWGKQQKLLEGLEDIAEGAITVELQSEIIADFDRYMMQL 349
            .:|.||:|.||||.|.:..|.|:.||.||.:...:...|.:||||||:..:...|..||||....
Zfish   283 EDDIRRVLDAAKRNNQTGHFLWVGSDSWGSKISPVVQQESVAEGAITILPKRASIEAFDRYFKSR 347

  Fly   350 TPETNQRNPWFAEYWEDTFNCVLTSLSVKPDTSNSANSTDNKIGVKAKTECDDSYRLSEKVG--- 411
            :...|:||.||||:||:.|.|.|.....:|.:.......                   ||||   
Zfish   348 SLSNNRRNVWFAEFWEENFGCKLGMHGKRPGSPRKCTGL-------------------EKVGRDS 393

  Fly   412 -YEQESKTQFVVDAVYAFAYALHNLHNDRCNTQSDQTTETRKHLQSESVWYRKISTDTKSQACPD 475
             ||||.|.|||:|||||.|:|||.:|.|.|:....                          .||.
Zfish   394 TYEQEGKVQFVMDAVYAMAHALHRMHRDLCSGYPG--------------------------LCPR 432

  Fly   476 MANYDGKEFYNNYLLNVSFIDLAGSEVKFDRQGDGLARYDILNYQRQENSSGYQYKVIGKWFNGL 540
            |:|.||||.. .|:.||||...|.:.|.|:..||...||||..||....|:  :|::||.|.:.|
Zfish   433 MSNIDGKELL-GYIRNVSFNGSAKTLVVFNENGDAPGRYDIYQYQITNKST--EYRIIGHWTDQL 494

  Fly   541 QLNSETVVW-NKETEQPTSACSLPCEVGMIKK-QQGDTCCWICDSCESFEYVYDEFTCKDCGPGL 603
            .||...:.| :.:...|||.|||||::|..|| .:|..|||.|:.||.:.|...||||:.|...|
Zfish   495 HLNINAMQWASGDDVMPTSVCSLPCQMGERKKIVKGVPCCWHCERCEGYHYQASEFTCQICPYEL 559

  Fly   604 WPYADKLSCYALDIQYMKWNSLFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSYTL 668
            .|..::..|..:.|..::|:|.:|::|:.|||.||..|:.|:|.|.:.:|||:|||||||:||.|
Zfish   560 RPDQNRTGCQPIPIIKLEWHSPWAVVPVFIAILGILATTFVVVTFVRYNDTPIVRASGREMSYVL 624

  Fly   669 LFGILVCYCNTFALIAKPTIGSCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSASKSAQRLKYI 733
            |.||.:||..||.:|..|.:..|..:|..:|:|....|:|||||||||.|||.....|....::|
Zfish   625 LTGIFLCYVITFPMIGAPGVAVCSFRRIFLGLGMCFSYAALLTKTNRIHRIFEQGKCSVAAPRFI 689

  Fly   734 SPQSQVVITTSLIAIQVLITMIWMVVEPPGTRFYYPDRR-------EVILKCKIQDMSFLFSQLY 791
            ||.||:|||.|||::|::...:|.||:||.|...|.::|       ..:|||.|.|:|.:.|..|
Zfish   690 SPASQLVITFSLISVQLMGVFVWFVVDPPHTVVDYGEQRTQDPKNARGVLKCDISDLSLICSLGY 754

  Fly   792 NMILITICTIYAIKTRKIPENFNESKFIGFTMYTTCIIWLAFVPIYFGTGNSYE---VQTTTLCI 853
            :::|:..||:||||||.:||.|||:|.|||||||||||||||:||:|||..|.|   :||.||.:
Zfish   755 SILLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIIWLAFIPIFFGTAQSEERMYIQTATLTV 819

  Fly   854 SISLSASVALVCLYSPKVYILVFHPDKNVRKLTMNSTVYRRSAAAVAQGAPTSSGYSRTHAPGTS 918
            |:||||||:|..||.|||||::.||::||.|       .:||..|:...|..::..|:.    .|
Zfish   820 SLSLSASVSLGMLYMPKVYIIILHPEQNVPK-------RKRSFKAIVTAATMTNKLSQL----AS 873

  Fly   919 ALTGGAVGT-------NASSSTLPT 936
            ....|.|.|       |::.||..|
Zfish   874 ERPNGEVKTELCESVDNSAPSTKTT 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_001259076.1 Periplasmic_Binding_Protein_Type_1 43..542 CDD:299141 224/504 (44%)
ANF_receptor 72..518 CDD:279440 196/450 (44%)
NCD3G 557..604 CDD:284890 23/47 (49%)
7tm_3 638..873 CDD:278433 127/244 (52%)
grm8bNP_001274468.1 Periplasmic_Binding_Protein_Type_1 43..503 CDD:299141 226/511 (44%)
ANF_receptor 73..477 CDD:279440 197/453 (43%)
NCD3G 512..558 CDD:284890 23/45 (51%)
7tm_3 594..839 CDD:278433 127/244 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I12113
eggNOG 1 0.900 - - E33208_3B9DN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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