DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mGluR and grm6b

DIOPT Version :9

Sequence 1:NP_001259076.1 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001073489.1 Gene:grm6b / 565450 ZFINID:ZDB-GENE-021120-2 Length:905 Species:Danio rerio


Alignment Length:980 Identity:419/980 - (42%)
Similarity:577/980 - (58%) Gaps:113/980 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KNNNGTILVVVMVLSWSRVVDLKSPSNTHTQDSVSVSLPGDIILGGLFPVHEKG-EGAPCGPKVY 67
            |.:.|:::.::.:|:.....:.::.| :.||.. |:.:.|||.||||||||.:| .|.|||....
Zfish    21 KPHVGSLIHIMWILTMGFTPESQAAS-SDTQPH-SIKIEGDITLGGLFPVHSRGPAGIPCGEVKK 83

  Fly    68 NRGVQRLEAMLYAIDRVNNDPNILPGITIGVHILDTCSRDTYALNQSLQFVRASLNNLDTSGYEC 132
            .:|:.|:||||||:|::|:||::||.||:|..||||||||||||.|||.||:|.:.. |.|...|
Zfish    84 EKGIHRMEAMLYALDQINSDPDLLPNITLGARILDTCSRDTYALEQSLTFVQALIQK-DNSDVRC 147

  Fly   133 ADGSSPQLRKNASSGPVFGVIGGSYSSVSLQVANLLRLFHIPQVSPASTAKTLSDKTRFDLFART 197
            ::|..|.:.|...   |.||||.|.||||:.|||:||||.|||:|.||||..|||..|:|.|:|.
Zfish   148 SNGEPPIIPKPER---VVGVIGASASSVSIMVANVLRLFAIPQISYASTAPELSDNNRYDFFSRV 209

  Fly   198 VPPDTFQSVALVDILKNFNWSYVSTIHSEGSYGEYGIEALHKEATER-NVCIAVAEKVPSAADDK 261
            ||||:||:.|:|||:|...|:||||:.|||:|||.|::|..:.:.|. .:|||.|.|:|......
Zfish   210 VPPDSFQAQAMVDIVKAMGWNYVSTLASEGNYGESGVDAFIQISREAGGLCIAQAIKIPREPRPG 274

  Fly   262 VFDSIISKLQKKPNARGVVLFTRAEDARRILQAAKRANLSQPFHWIASDGWGKQQKLLEGLEDIA 326
            .||.||.:|.:..|||||::|...:|.:|:|:|||||||:..|.::.||.||.:...:...||:|
Zfish   275 EFDKIIKRLMETSNARGVIIFANEDDIKRVLEAAKRANLTGHFLFVGSDSWGAKISPILNQEDVA 339

  Fly   327 EGAITVELQSEIIADFDRYMMQLTPETNQRNPWFAEYWEDTFNCVLTSLSVKPDTSNSANSTDNK 391
            |||:|:..:...|..||:|....:.|.|:||.||||:|||.|.|.||...::.|.          
Zfish   340 EGAVTILPKRASIEGFDQYFTTRSLENNRRNIWFAEFWEDDFKCKLTRPGIRGDG---------- 394

  Fly   392 IGVKAKTECDDSYRLSEKVGYEQESKTQFVVDAVYAFAYALHNLHNDRCNTQSDQTTETRKHLQS 456
             |::   :|....|:....|||||.|.|||:|||||.|:|||::|.|.|                
Zfish   395 -GLR---KCTGEERIGRDSGYEQEGKVQFVIDAVYAMAHALHSMHIDLC---------------- 439

  Fly   457 ESVWYRKISTDTKSQACPDMANYDGKEFYNNYLLNVSFIDLAGSEVKFDRQGDGLARYDILNYQR 521
                      ......|..|...||:... .|:..|:|...||:.|.|:..||...||||..|| 
Zfish   440 ----------PGSMGVCDKMDPVDGRMLL-TYIRAVNFNGSAGTGVMFNENGDAPGRYDIFQYQ- 492

  Fly   522 QENSSGYQYKVIGKWFNGLQLNSETVVWN-KETEQPTSACSLPCEVGMIKKQ-QGDTCCWICDSC 584
            ..|::...||:||:|.|.|:|::|.:.|: .|...|.|.||.|||.|..|:. :|..|||.|:.|
Zfish   493 LSNTTNPGYKLIGQWTNHLRLSAEDMQWSGGEKLVPDSVCSFPCESGERKRMVKGVPCCWHCELC 557

  Fly   585 ESFEYVYDEFTCKDCGPGLWPYADKLSCYALDIQYMKWNSLFALIPMAIAIFGIALTSIVIVLFA 649
            :.::::.|||.|..|...:.|..::.:|....|..::|:|.:|:||:.:|:.||..|:.||..|.
Zfish   558 DGYQFLLDEFNCDMCPFDMRPTPNRTACRPTPIIKLEWSSPWAIIPVFLAVLGILATTGVIATFI 622

  Fly   650 KNHDTPLVRASGRELSYTLLFGILVCYCNTFALIAKPTIGSCVLQRFGIGVGFSIIYSALLTKTN 714
            :.:|||:||||||||||.||.||.:.|..||.:||:|....|..:|..:|:|..|.|||:|||||
Zfish   623 RFNDTPIVRASGRELSYVLLTGIFLIYLITFLMIAEPGTVVCAFRRLLLGLGMCISYSAMLTKTN 687

  Fly   715 RISRIFHSASKSAQRLKYISPQSQVVITTSLIAIQVLITMIWMVVEPPGTRFYY-------PDRR 772
            ||.|||....||....|:|||.||::||..||::|:|...||..|.||.|...:       |:..
Zfish   688 RIYRIFEQGKKSVTPPKFISPTSQLIITFILISVQLLGIFIWFGVVPPHTNVDFDELRPPNPEFA 752

  Fly   773 EVILKCKIQDMSFLFSQLYNMILITICTIYAIKTRKIPENFNESKFIGFTMYTTCIIWLAFVPIY 837
            ..||||.:.|:|.:....|:|.|:..||:||||:|.:||.|||:|.||||||||||||||||||:
Zfish   753 RGILKCDMSDLSLIGCLSYSMGLMVTCTVYAIKSRGVPETFNEAKPIGFTMYTTCIIWLAFVPIF 817

  Fly   838 FGTGNSYE---VQTTTLCISISLSASVALVCLYSPKVYILVFHPDKNVRKLTMNSTVYRRSAAAV 899
            |||..|.|   :|||||.:|:||||:|:|..||.||||:::|||::||:|       .:||..||
Zfish   818 FGTSQSTEKMFIQTTTLTVSMSLSATVSLGMLYIPKVYVIIFHPEQNVQK-------RKRSFKAV 875

  Fly   900 AQGAPTSSGYSRTHAPGTSALTGGAVGTNASSSTLPTQNSPHLDEASAQTNVAHKTNGEFLPEVG 964
            ||.|..|:                                 ||.:.|:.     |.|||      
Zfish   876 AQAATVST---------------------------------HLSQKSSD-----KQNGE------ 896

  Fly   965 ERVEP 969
            .:|||
Zfish   897 TKVEP 901

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_001259076.1 Periplasmic_Binding_Protein_Type_1 43..542 CDD:299141 224/500 (45%)
ANF_receptor 72..518 CDD:279440 197/446 (44%)
NCD3G 557..604 CDD:284890 19/47 (40%)
7tm_3 638..873 CDD:278433 129/244 (53%)
grm6bNP_001073489.1 PBP1_mGluR_groupIII 58..520 CDD:107371 226/507 (45%)
ANF_receptor 88..492 CDD:279440 197/448 (44%)
NCD3G 530..576 CDD:284890 19/45 (42%)
7tm_3 611..856 CDD:278433 129/244 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X509
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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