DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and Vmn2r1

DIOPT Version :10

Sequence 1:NP_524639.2 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_064302.2 Gene:Vmn2r1 / 56544 MGIID:3645892 Length:912 Species:Mus musculus


Alignment Length:970 Identity:249/970 - (25%)
Similarity:431/970 - (44%) Gaps:142/970 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SRVVDLKSPSNTHTQDSVSVSLPGDIILGGLFPVHEK----GEG--APCGP--KVYN-RGVQRLE 75
            |..||.|:.|               :::.||||:|.:    .|.  .|..|  :.:| ||.:.::
Mouse    40 SGYVDAKNHS---------------LVIAGLFPIHSRIIPVDEAILEPVSPMCEGFNFRGFRWMK 89

  Fly    76 AMLYAIDRVNNDPNILPGITIGVHILDTCSRDTYALNQSLQFVRASLNNLDTSGYECADGSSPQL 140
            .|::.|..:|...:|||..|:|..|.|:|...:.|:..||.|:         :|.|   ...|..
Mouse    90 TMIHTIKEINERKDILPNHTLGYQIFDSCYTISKAMESSLVFL---------TGQE---EFKPNF 142

  Fly   141 RKNASSGPVFGVIGGSYSSVSLQVANLLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQS 205
            | |::...:..::|...||:|:..:.:|.|:::|||...|:...||||.:|..:.|.:|.|..||
Mouse   143 R-NSTGSTLAALVGSGGSSLSVAASRILGLYYMPQVGYTSSCSILSDKFQFPSYLRVLPSDNLQS 206

  Fly   206 VALVDILKNFNWSYVSTIHSEGSYGEYGIEALHKEATERNVCIAVAEKVPSAADDKVFDSIISKL 270
            .|:|:::|:|.|.:|..|.::..||:||::...::....|:|:|.:|.:|....::.....: |.
Mouse   207 EAIVNLIKHFGWVWVGAIAADDDYGKYGVKTFKEKMESANLCVAFSETIPKVYSNEKMQKAV-KA 270

  Fly   271 QKKPNARGVVLFTRAEDARRILQAAKRANLSQPFHWIASDGWGKQQKLLEGLEDIAE-------- 327
            .|...|:.:||:|...|....:......|::.. .|||::.|     :...|  ||:        
Mouse   271 VKTSTAKVIVLYTSDIDLSLFVLEMIHHNITDR-TWIATEAW-----ITSAL--IAKPEYFPYFG 327

  Fly   328 GAITVELQSEIIADFDRYMMQLTPETNQRNPWFAEYWEDTFNCVLTSLSVKPDTSNSANST--DN 390
            |.|.......:|.....::..:.|..:..:....|:|:..|||...:.||..:..:..|.|  ::
Mouse   328 GTIGFATPRSVIPGLKEFLYDVHPNKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKED 392

  Fly   391 KIGVKAKTECDDSYRLSE-KVGYEQESK---TQFVVDAVYAFAYALHNLHNDRCNTQSDQTTETR 451
            ::...:...|....:|.: |..|...|:   |..|..||||.|:.|.  |..||  |..|     
Mouse   393 RLYDMSDQLCTGEEKLEDLKNTYLDTSQLRITNNVKQAVYAIAHGLD--HLSRC--QEGQ----- 448

  Fly   452 KHLQSESVWYRKISTDTKSQACPDMANYDGKEFYN--NYLLNVSFIDLAGSEVKFDRQGD-GLAR 513
                         .....:|.|..:..:|   |:.  .|:..:.|.......|..|..|| ....
Mouse   449 -------------GPFGSNQQCAYIPTFD---FWQLMYYMKEIKFKSHEDKWVILDDNGDLKNGH 497

  Fly   514 YDILNYQRQENSSGYQYKVIGKWFNGLQLNSE-------TVVWNKE-TEQPTSACSLPCEVGMIK 570
            ||:||:...:... ..:..:|: ||....|.|       |:.||.| :.:|.|.|:..|..|..|
Mouse   498 YDVLNWHLDDEGE-ISFVTVGR-FNFRSTNFELVIPTNSTIFWNTESSRRPDSFCTQVCPPGTRK 560

  Fly   571 --KQQGDTCCWICDSCESFEYVYD---EFTCKDCGPGLWPYADKLSCYALDIQYMKWNSLFALIP 630
              :|....||:.|..|.. .||.:   :..|..||...|..|:|..|....::::.:........
Mouse   561 GIRQGQPICCFDCIPCAD-GYVSEKPGQRECDPCGEDDWSNAEKSKCVPKLVEFLAYEEALGFTL 624

  Fly   631 MAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGILVCYCNTFALIAKPTIGSCVLQR 695
            :.::|||..:...|.|::..:..||||:|:.||||:.:...:::...::...|.||...||:.::
Mouse   625 VILSIFGALVLLAVTVVYVIHRHTPLVKANDRELSFLIQMSLVITVLSSLLFIGKPCNWSCMARQ 689

  Fly   696 FGIGVGFSIIYSALLTKTNRISRIF-HSASKSAQRLKYISPQSQVVITTSLIAIQVLITMIWMVV 759
            ..:.:||.:..|::|.||  ||..| :..|.|..||..:.|..:.:|....:..::.|...::|:
Mouse   690 ITLALGFCLCLSSILGKT--ISLFFAYRISVSKTRLISMHPIFRKLIVLICVVGEIGICAAYLVL 752

  Fly   760 EPPGTRFYYP---DRREVILKCKIQDMSFLFSQL-YNMILITICTIYAIKTRKIPENFNESKFIG 820
            |||  |.:..   ...::|.:|....:.||.|.. ::::|..:|.:.....|::|:|:.|.|.|.
Mouse   753 EPP--RMFKNIEIQNVKIIFECNEGSIEFLCSIFGFDVLLALLCFLTTFVARQLPDNYYEGKCIT 815

  Fly   821 FTMYTTCIIWLAFVPIYFGTGNSYEVQTTTLCISISLSASVALV-CLYSPKVYILVFHPDKNVRK 884
            |.|....|:|::|||.|..|...::|......|   |::|..|: ||:.||.:|::..|.:|.  
Mouse   816 FGMLVFFIVWISFVPAYLSTKGKFKVAVEIFAI---LASSYGLLGCLFLPKCFIILLRPKRNT-- 875

  Fly   885 LTMNSTVYRRSAAAVAQGAPTSSGYSRTHAPGTSALTGGAVGTNASSSTLPTQNSPHLDE 944
               :.||..|        .||        ...:..||..:|.:..:|:|:.|.    |||
Mouse   876 ---DETVGGR--------VPT--------VDRSIQLTSASVSSELNSTTVSTV----LDE 912

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_524639.2 PBP1_mGluR_groupII 39..542 CDD:380598 130/528 (25%)
NCD3G 556..605 CDD:462210 16/53 (30%)
7tmC_mGluRs_group2_3 625..876 CDD:320600 72/256 (28%)
TM helix 1 625..650 CDD:320600 5/24 (21%)
TM helix 2 662..683 CDD:320600 4/20 (20%)
TM helix 3 692..716 CDD:320600 6/23 (26%)
TM helix 4 738..758 CDD:320600 2/19 (11%)
TM helix 5 781..807 CDD:320600 5/26 (19%)
TM helix 6 815..838 CDD:320600 10/22 (45%)
TM helix 7 845..870 CDD:320600 7/25 (28%)
Vmn2r1NP_064302.2 PBP1_CaSR 51..538 CDD:380587 133/535 (25%)
NCD3G 546..599 CDD:462210 16/53 (30%)
7tmC_V2R-like 619..871 CDD:320407 72/258 (28%)
TM helix 1 619..644 CDD:320407 5/24 (21%)
TM helix 2 656..677 CDD:320407 4/20 (20%)
TM helix 3 686..710 CDD:320407 7/25 (28%)
TM helix 4 733..749 CDD:320407 2/15 (13%)
TM helix 5 776..802 CDD:320407 5/25 (20%)
TM helix 6 810..833 CDD:320407 10/22 (45%)
TM helix 7 838..863 CDD:320407 7/27 (26%)

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