DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mGluR and grm3

DIOPT Version :9

Sequence 1:NP_001259076.1 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001121815.1 Gene:grm3 / 565256 ZFINID:ZDB-GENE-061009-13 Length:884 Species:Danio rerio


Alignment Length:903 Identity:438/903 - (48%)
Similarity:586/903 - (64%) Gaps:66/903 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VSLPGDIILGGLFPVHEKGEGA-PCGPKVYNRGVQRLEAMLYAIDRVNNDPNILPGITIGVHILD 102
            :.:.||::||||||:||||.|. .||....:||:|||||||:|||::|.|..:|||:.:||||||
Zfish    27 IKIDGDLVLGGLFPIHEKGMGMDECGRINEDRGIQRLEAMLFAIDQINQDVALLPGVVLGVHILD 91

  Fly   103 TCSRDTYALNQSLQFVRASLNNLDTSGYECADGSSPQLRKNASSGPVFGVIGGSYSSVSLQVANL 167
            |||||||||.|:|:||||||..:|.:.:.|.|||  ...:..|...:.||||||:||||:|||||
Zfish    92 TCSRDTYALEQALEFVRASLTKVDDTEFICPDGS--YALQEDSPLAIAGVIGGSFSSVSIQVANL 154

  Fly   168 LRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQSVALVDILKNFNWSYVSTIHSEGSYGEY 232
            ||||.|||:|.|||:..||||:|:|.||||||||.:|:.|:.:||:.|||:||||:.|||.|||.
Zfish   155 LRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEILRAFNWTYVSTVASEGDYGET 219

  Fly   233 GIEALHKEATERNVCIAVAEKV-PSAADDKVFDSIISKLQKKPNARGVVLFTRAEDARRILQAAK 296
            ||||..::|..||:|||.:||| .|:|....:::::.:|.:||.||..|||.|::|||.::.||.
Zfish   220 GIEAFEQQARLRNICIATSEKVGRSSAKRSSYEAVVRQLLQKPTARVAVLFLRSDDARELIAAAA 284

  Fly   297 RANLSQPFHWIASDGWGKQQKLLEGLEDIAEGAITVELQSEIIADFDRYMMQLTPETNQRNPWFA 361
            |.|.|  |.|:||||||.|:.:::|.|..|:||||:||.:..|.||:||...|||:.|.|||||.
Zfish   285 RLNAS--FLWVASDGWGAQESIVKGNEFTADGAITLELAAHPIPDFNRYFQTLTPQINHRNPWFK 347

  Fly   362 EYWEDTFNCVLTSLSVKPDTSNSANSTDNKIGVKAKTECDDSYRLSEKVGYEQESKTQFVVDAVY 426
            ::||..|.|.|..      ||.:...|       .|..||... :.:|..:|.|||..|||:|||
Zfish   348 DFWEQKFQCSLGG------TSATGAGT-------PKPPCDQEL-VIDKSNFEPESKIMFVVNAVY 398

  Fly   427 AFAYALHNLHNDRC-NTQSDQTTETRKHLQSESVWYRKISTDTKSQACPDMANYDGKEFYNNYLL 490
            |.|:|||.:....| ||                           ::.|..|.:.||::.|.::||
Zfish   399 AMAHALHRMQRTLCANT---------------------------TRLCDAMRSLDGRKLYRDFLL 436

  Fly   491 NVSF---IDLAG--SEVKFDRQGDGLARYDILNYQRQENSSGYQYKVIGKWFNGLQLNSETVVWN 550
            :|:|   ...||  |:||||..|||:.||:|.|||....|..:.|..:|:|...|.||...:.|.
Zfish   437 HVNFRAPFSPAGLESQVKFDAYGDGVGRYNIFNYQSVPGSDKFAYVQVGEWAESLSLNEGLIGWP 501

  Fly   551 KETEQPTSACSLPCEVGMIKKQQ-GDTCCWICDSCESFEYVYDEFTCKDCGPGLWPYADKLSCYA 614
            :..:.|||.||.||....:||.| |:.|||||..||.:||:.|||||..|.||.||..|...||.
Zfish   502 RGADVPTSQCSDPCAPNEMKKMQAGEYCCWICTPCEPYEYLPDEFTCMPCAPGQWPRPDLTGCYD 566

  Fly   615 LDIQYMKWNSLFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGILVCYCNT 679
            |...|:.|...:|:.|::||..|...|.:|.::|.:::|||||:||||||.|.||.|:.:.|..|
Zfish   567 LPEDYIMWEDAWAIGPISIACVGFICTLMVFIVFIRHNDTPLVKASGRELCYILLLGVFMSYVMT 631

  Fly   680 FALIAKPTIGSCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSASK-SAQRLKYISPQSQVVITT 743
            |..||||:...|.|:|.|:|..|::.|||||||||||:|||....: .|||.::|||.|||.|..
Zfish   632 FIFIAKPSPIVCTLRRLGLGTSFAVCYSALLTKTNRIARIFSGVKEGGAQRPRFISPSSQVFICL 696

  Fly   744 SLIAIQVLITMIWMVVEPPGT-RFYYPDRRE-VILKCKIQDMSFLFSQLYNMILITICTIYAIKT 806
            |||::|:|:..:|::||.||| ||..|::|: |||||.::|.|.|.|..|:::|:.:||:||.||
Zfish   697 SLISVQLLLVSVWLLVEVPGTRRFTTPEKRQTVILKCNVRDSSMLMSLSYDVVLVVLCTVYAFKT 761

  Fly   807 RKIPENFNESKFIGFTMYTTCIIWLAFVPIYFGTGNSYEVQTTTLCISISLSASVALVCLYSPKV 871
            ||.||||||:|||||||||||||||||:||::.|.:.|.|||||:|||:|||..|.|.|:::|||
Zfish   762 RKCPENFNEAKFIGFTMYTTCIIWLAFLPIFYVTSSDYRVQTTTMCISVSLSGFVVLGCMFAPKV 826

  Fly   872 YILVFHPDKNV--RKLTMNSTVYRRSAAAVAQGAPTSSGYSRTHAPG-------TSAL 920
            :|::|.|.|||  .:|.||.......|.:.|..|..|:.|..|...|       ||:|
Zfish   827 HIIMFQPQKNVTSHRLNMNRFSVSGPATSYASHASVSAHYVPTVCNGREIVDSTTSSL 884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_001259076.1 Periplasmic_Binding_Protein_Type_1 43..542 CDD:299141 242/506 (48%)
ANF_receptor 72..518 CDD:279440 217/452 (48%)
NCD3G 557..604 CDD:284890 27/47 (57%)
7tm_3 638..873 CDD:278433 133/237 (56%)
grm3NP_001121815.1 PBP1_mGluR_groupII 31..493 CDD:107370 242/506 (48%)
ANF_receptor 61..471 CDD:279440 218/454 (48%)
NCD3G 508..556 CDD:284890 27/47 (57%)
7tm_3 590..828 CDD:278433 133/237 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580273
Domainoid 1 1.000 396 1.000 Domainoid score I725
eggNOG 1 0.900 - - E33208_3B9DN
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H651
Inparanoid 1 1.050 826 1.000 Inparanoid score I449
OMA 1 1.010 - - QHG49358
OrthoDB 1 1.010 - - D1154468at2759
OrthoFinder 1 1.000 - - FOG0003689
OrthoInspector 1 1.000 - - otm24465
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24060
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2555
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.900

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