DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and olfcr1

DIOPT Version :10

Sequence 1:NP_524639.2 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001417787.1 Gene:olfcr1 / 562852 ZFINID:ZDB-GENE-060503-302 Length:864 Species:Danio rerio


Alignment Length:922 Identity:244/922 - (26%)
Similarity:416/922 - (45%) Gaps:113/922 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TILVVVMVL-----SWSRVVDLKSPSNTHT---QDSVSVSLPGDIILGGLFPVH----------- 54
            |:.|.|::|     |.:.|..|::.....|   .|.:.....||:|:|||..:|           
Zfish    10 TLSVPVLLLWPVCGSGTEVTPLETCVYLITPQYSDELGTYQDGDVIIGGLINLHNLAATPDLSFT 74

  Fly    55 EKGEGAPCGPKVYNRGVQRLEAMLYAIDRVNNDPNILPGITIGVHILDTCSRDTYALNQSLQFVR 119
            .|...|.| .:...|..:..:|:::.::.:|..|::|||:.:|.||:|:|||..::|..::..:.
Zfish    75 RKPGLAQC-LEFQERTYRWFQAIVFTVEEINQHPSLLPGVKLGYHIMDSCSRYPHSLTAAMSMIS 138

  Fly   120 ASLNNLDTSGYECADGSSPQLRKNASSGPVFG---VIGGSYSSVSLQVANLLRLFHIPQVSPAST 181
            ..                     |.:.||...   :||.|.|:.|:.::..|....||.:|..:.
Zfish   139 GG---------------------NKTCGPTKPAKLLIGDSSSTQSILLSTTLVPLKIPMISYLAG 182

  Fly   182 AKTLSDKTRFDLFARTVPPDTFQSVALVDILKNFNWSYVSTIHSEGSYGEYGIEALHKEATERNV 246
            ...|||:.::..|.||:|.|.:|:..:|.|.|.|.|:::..:.::...|...::||.:|.....:
Zfish   183 CPCLSDRQKYPNFFRTIPSDFYQARTMVQIAKRFGWTWIGAVIADSDNGHGTLQALEEEIKGTGI 247

  Fly   247 CIA-----VAEKVPSAADDKVFDSIISKLQKKPNARGVVLFTRAEDARRILQAAKRANLSQPFHW 306
            |:|     ..|::..   |..|   .::..:..:||.:::.....|....|....|.|::... :
Zfish   248 CLAFYHTLYRERLQK---DVAF---AARTVQASSARVILVLAWYTDVEAFLLELMRRNVTDRL-F 305

  Fly   307 IASDGWGKQQKLLEG--LEDIAEGAITVELQSEIIADFDRYMMQLTPETNQRNPWFAEYWEDTFN 369
            :||:.|.....::..  |..|::|.:.|.|:|..|..|..::.||.|.....:.:....||:||.
Zfish   306 LASEIWSTSYNIMANPQLYTISKGTLGVALRSAPIPGFSAHLQQLHPSRYPEDKFLRTLWENTFG 370

  Fly   370 CVLTSLSVKPDTSNSANSTDNKIGVKAKTECDDSYRLSEKVGYEQESKTQFVVDAVYAFAYALHN 434
            |..| :|......||......:..::...|..|:..|:  |.|.       :..||||.|:|||:
Zfish   371 CSPT-ISSSKIIQNSLPPCSGRESLEGHIEFIDTSHLT--VSYN-------IYLAVYAAAHALHS 425

  Fly   435 LHNDRCNTQSDQTTETRKHLQSESVWYRKISTDTK-SQACPDMANYDGKEFYNNYLLNVSFIDLA 498
            |.  .||:|:                    .||:| ...|....|....:.. .::.:|.:....
Zfish   426 LL--ECNSQN--------------------HTDSKIKPKCSSPDNITPAQLL-QHVKDVQYTTQL 467

  Fly   499 GSEVKFDRQGDGLARYDILNYQRQENSSGYQYKVIGKW-FNGLQLNSETVVWNKET-EQPTSACS 561
            |.|..| .:|.....||::|:|...:.| .||..||.. .|.|.:|...:.|..:: :.|.|.|:
Zfish   468 GEEFYF-LEGGIPPVYDLVNWQIAPDGS-LQYAFIGHVDGNQLSINDSAITWPGDSGKVPISVCT 530

  Fly   562 LPCEVGMIK--KQQGDTCCWICDSCESFEYVYD--EFTCKDCGPGLWPYADKLSCYALDIQYMKW 622
            ..|..|..|  |:....||:.|..|...|....  ...|..|....|..:.|..|.|.:.:::..
Zfish   531 SECPPGTRKAIKKGLPVCCFDCLPCTEGEISNSTGSIKCYRCPKEFWSNSYKNECVARETEFLSV 595

  Fly   623 NSLFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGILVCYCNTFALIAKPT 687
            .....:..|::|:.|..:|:.|.|:|..:.:||:|:|:..|||:.||..:.:|:......:.:|:
Zfish   596 KETMGITLMSVAVSGAVMTTTVAVIFLYHRNTPIVKANNSELSFLLLLSLKLCFLCALVFVGQPS 660

  Fly   688 IGSCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSA-SKSAQRLKYISPQSQVVITTSLIAIQVL 751
            :.||.:|:...|:.|.:..|.:|.||..:...|||. .:|:..:|:.....|..|......:||:
Zfish   661 LWSCRIQQAAFGISFVLCISCILVKTFVVLIAFHSTRPESSALIKWFGLGKQRGIVLVFTCVQVV 725

  Fly   752 ITMIWMVVEPPGTRFYYPD----RREVILKCKIQD-MSFLFSQLYNMILITICTIYAIKTRKIPE 811
            |..||:.|.||   ..|.:    |.:|||:|.|.. :.|.....|...|.|:|.:.|...||:|:
Zfish   726 ICAIWLCVSPP---LPYQNFGMHRSKVILECTIGSVVGFTCVLGYIGFLATVCFLLAFFARKLPD 787

  Fly   812 NFNESKFIGFTMYTTCIIWLAFVPIYFGTGNSYEVQTTTLCISISLSASVALV-CLYSPKVYILV 875
            ||||:|:|.|:|...|.:|:||||.|..:...|.|......|   |::|..|: |::.||.||::
Zfish   788 NFNEAKYITFSMLIFCAVWVAFVPAYVSSPGKYSVVVEVFAI---LASSFGLLFCIFVPKCYIIL 849

  Fly   876 FHPDKNVRKLTM 887
            ..|:.|.:|..|
Zfish   850 LKPENNTKKFLM 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_524639.2 PBP1_mGluR_groupII 39..542 CDD:380598 127/525 (24%)
NCD3G 556..605 CDD:462210 14/52 (27%)
7tmC_mGluRs_group2_3 625..876 CDD:320600 84/257 (33%)
TM helix 1 625..650 CDD:320600 7/24 (29%)
TM helix 2 662..683 CDD:320600 6/20 (30%)
TM helix 3 692..716 CDD:320600 7/23 (30%)
TM helix 4 738..758 CDD:320600 7/19 (37%)
TM helix 5 781..807 CDD:320600 6/26 (23%)
TM helix 6 815..838 CDD:320600 11/22 (50%)
TM helix 7 845..870 CDD:320600 6/25 (24%)
olfcr1NP_001417787.1 Periplasmic_Binding_Protein_type1 55..517 CDD:471960 126/525 (24%)
NCD3G 525..578 CDD:462210 14/52 (27%)
7tmC_V2R_pheromone 598..850 CDD:320410 84/257 (33%)
TM helix 1 598..623 CDD:320410 7/24 (29%)
TM helix 2 635..656 CDD:320410 6/20 (30%)
TM helix 3 665..689 CDD:320410 7/23 (30%)
TM helix 4 714..730 CDD:320410 4/15 (27%)
TM helix 5 757..783 CDD:320410 6/25 (24%)
TM helix 6 791..814 CDD:320410 11/22 (50%)
TM helix 7 819..844 CDD:320410 7/27 (26%)

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