DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and gprc6a

DIOPT Version :10

Sequence 1:NP_524639.2 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001008731.1 Gene:gprc6a / 494131 ZFINID:ZDB-GENE-041217-22 Length:867 Species:Danio rerio


Alignment Length:1004 Identity:247/1004 - (24%)
Similarity:417/1004 - (41%) Gaps:204/1004 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VLSWSRVVDLKSPSNTHTQDSVSVSLPGDIILGGLFPVHE----------KGEGAPCGP---KVY 67
            :|.|:.::.:...|.... ..:..|.||:||:|||||:||          ....||..|   :.|
Zfish     7 ILLWAGLMKVAEASIAQF-SQLGASAPGNIIIGGLFPIHEAVVPVNYTGNNSISAPEHPDCIRFY 70

  Fly    68 NRGVQRLEAMLYAIDRVNNDPNILP-GITIGVHILDTCSRDTYALNQSLQFVRASLNNLDTSGYE 131
            .:|:.:..||:.|::..|..|.:.. .||:|..|.||||..|.||......:|      ..|..|
Zfish    71 TKGLNQALAMINAVEMANKSPMLSSLNITLGYRIYDTCSDVTTALRAVHDIMR------PFSDCE 129

  Fly   132 CADGSSPQLRKNASSGPVFGVIGGSYSSVSLQVANLLRLFHIPQVSPASTAKTLSDKTRFDLFAR 196
            ..:.||..::      |:..|||.:.|.:|:.||..|.|..|||:|.||||..||||:||..|.|
Zfish   130 SPEDSSQPVQ------PIMAVIGTTSSEISIAVARDLNLQMIPQISYASTATILSDKSRFPAFMR 188

  Fly   197 TVPPDTFQSVALVDILKNFNWSYVSTIHSEGSYGEYGIEALHKEATERNVCIAVAEKVP-SAADD 260
            |||.|.:|:.|:..:||:..||:|..|.::|.||...:|...:......:|||....:| |.||.
Zfish   189 TVPSDEYQTCAMAKLLKSNKWSWVGIIITDGDYGRSALEGFIQHTETEGICIAFKAILPDSLADQ 253

  Fly   261 KVFDSIISK----LQKKPNARGVVLFTRAEDARRILQAAKRANLSQPFHWIASDGWGKQQKLLEG 321
            :..::.|..    ::..|..|.|:.|.::...:.:.:..:..|:|....|:|||.|...:.:|. 
Zfish   254 QKLNTDIENTLNIIENNPKVRVVISFAKSSQMQLLFKGLQSRNISNNMVWVASDNWSTAKHILN- 317

  Fly   322 LEDIAEGAIT-------VELQSEIIADFDRYM--MQLTPETNQRNPWFAEYWEDTFNCVLTSLSV 377
                 :|:||       ...:|.....|.:|:  :|...|....|.:..|:.:            
Zfish   318 -----DGSITDIGKVLGFTFKSGNFTSFHQYLKNLQFESEDEMNNSFLKEFLK------------ 365

  Fly   378 KPDTSNSANSTDNKIGVKAKTECDDSYRLSEKVGYEQESKTQFVVDAVYAFAYALHNLHNDR-C- 440
                .|:.|:::..:.:...|..|..:.:..               ||.|.|.|:..|..:| | 
Zfish   366 ----LNAGNASNTVLELMKSTNLDKIFSIEM---------------AVTAVANAVAKLCAERQCQ 411

  Fly   441 NTQSDQTTETRKHLQSESVWYRKISTDTKSQACPDMANYDGKEFYNNYLLNVSFIDLAGSEVKFD 505
            ::.:.|..|..:.|:|                   :...:|.|.|                 |||
Zfish   412 DSTALQPWELLRQLRS-------------------ITFENGGEMY-----------------KFD 440

  Fly   506 RQGDGLARYDILNYQRQEN--------------SSGYQYKVIGKWFNGLQLNSETVVWN--KETE 554
            ..||....||:..::..::              ..|:.|                 :.|  .|.:
Zfish   441 ANGDINLGYDLFLWEGDQSDEHADDIIAEYDPTKGGFHY-----------------IHNDLSEIK 488

  Fly   555 QPTSACSLPCEVGMIKK-QQGD-TCCWICDSCESFEY--VYDEFTCKDC-GPGLWPYADKLSCYA 614
            :..|.||..|:.|..|| .:|. |||:.|.:|....|  :.|...|..| ...:|..|:...|:.
Zfish   489 KVVSRCSNSCQPGQYKKTAEGQHTCCYECLTCVENHYSNITDADECSPCDSESMWSLANSTECHP 553

  Fly   615 LDIQYMKWNSLFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGILVCYCNT 679
            ...:|..|||.||::.:.:|..|:.|...:..||.....:|:|:|:|..|.:.:|..:|..:.:.
Zfish   554 KVFEYFDWNSGFAIVLLILAALGVLLLFFMSALFFWQRHSPVVKAAGGPLCHLILVSLLGSFISV 618

  Fly   680 FALIAKPTIGSCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSASKSAQRLKYISPQSQVVITTS 744
            ...:.:|:..:|..::...|..|::..|.:|.|:.:|...|....:..:.|..:  ....:|.:.
Zfish   619 VFFVGEPSDLTCRARQVIFGFSFTLCVSCILVKSLKILLAFEMNFELKELLCML--YKPYMIVSV 681

  Fly   745 LIAIQVLITMIWMVVEPPGTRFYYPDR----REVILKCKIQDMSFLFSQL--YNMILITICTIYA 803
            .:.:|::|..:|:.:..|     :.|:    ..::|:|. :....:|..:  |..:|...|..:|
Zfish   682 GMGVQIIICTVWLTLYKP-----FKDKEVQTESILLECN-EGFYVMFWLMLGYIALLALFCFTFA 740

  Fly   804 IKTRKIPENFNESKFIGFTMYTTCIIWLAFVPIYFGTGNSYEVQTTTLCISISLSASVALVCLYS 868
            ...||:|:.:||:|||.|:|....:.|:.|:||:..|...|......:.|.||...  .|.|.:.
Zfish   741 YIGRKLPQKYNEAKFITFSMVICLMAWIIFIPIHVTTSGKYVPAVEMVVILISNYG--ILSCHFL 803

  Fly   869 PKVYILVFHPDKNVRKLTMNSTVYRRSAAAVAQGAPTSSGYSRTHAPGTSALTGGAVGTNASSST 933
            ||.||::|..:.|.:...|.: ||.               |:|..|.....|||          |
Zfish   804 PKSYIILFKKEHNTKDAFMKN-VYE---------------YARKSAENIKGLTG----------T 842

  Fly   934 LPTQNSPHLDEASAQTNVAHKTNGEFLPE 962
            .|        :...:.:|...:|..|:||
Zfish   843 EP--------QFKQENSVYTISNLSFVPE 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_524639.2 PBP1_mGluR_groupII 39..542 CDD:380598 138/546 (25%)
NCD3G 556..605 CDD:462210 17/53 (32%)
7tmC_mGluRs_group2_3 625..876 CDD:320600 62/256 (24%)
TM helix 1 625..650 CDD:320600 7/24 (29%)
TM helix 2 662..683 CDD:320600 3/20 (15%)
TM helix 3 692..716 CDD:320600 5/23 (22%)
TM helix 4 738..758 CDD:320600 4/19 (21%)
TM helix 5 781..807 CDD:320600 5/27 (19%)
TM helix 6 815..838 CDD:320600 10/22 (45%)
TM helix 7 845..870 CDD:320600 5/24 (21%)
gprc6aNP_001008731.1 PBP1_GPC6A-like 36..482 CDD:380584 134/547 (24%)
NCD3G 491..544 CDD:462210 17/52 (33%)
7tmC_GPRC6A 564..811 CDD:320408 62/256 (24%)
TM helix 1 564..589 CDD:320408 7/24 (29%)
TM helix 2 601..622 CDD:320408 3/20 (15%)
TM helix 3 631..655 CDD:320408 5/23 (22%)
TM helix 4 677..693 CDD:320408 3/15 (20%)
TM helix 5 718..744 CDD:320408 5/25 (20%)
TM helix 6 752..775 CDD:320408 10/22 (45%)
TM helix 7 780..805 CDD:320408 6/26 (23%)

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