DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and Vmn2r43

DIOPT Version :10

Sequence 1:NP_524639.2 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_017177811.1 Gene:Vmn2r43 / 381838 MGIID:3037819 Length:861 Species:Mus musculus


Alignment Length:877 Identity:193/877 - (22%)
Similarity:359/877 - (40%) Gaps:183/877 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 AMLYAIDRVNNDPNILPGITIGV-HILDTCSRDT-----YALNQSLQFVRASLNNLDTSGYECAD 134
            |:::::|.:|.:|::||.:::.: :.|..|...|     |.|::..|   :.:.|     |.|  
Mouse    77 ALVFSMDEINRNPDLLPNMSLIIRYTLGRCDGKTGIPTPYLLHKKKQ---SPIPN-----YFC-- 131

  Fly   135 GSSPQLRKNASSGPVFGVIGGSYSSVSLQVANLLRLFHIP---QVSPASTAKTLSDKTRFDLFAR 196
                    |..|...|.:.|.:: .|||...|.|..|..|   |::......|.||..::....:
Mouse   132 --------NEESMCSFLLTGPNW-EVSLSFWNFLDSFLSPRILQLTYGPFHSTFSDDEQYPYLYQ 187

  Fly   197 TVPPDTFQSVALVDILKNFNWSYVSTIHSEGSYGEYGIEALHKEATERNVCIAVAEKVPSAADDK 261
            ..|.||..::|:|..:..|||:::..:..:...|...:..|.|::..:.:|.|..:.:  :.||.
Mouse   188 MAPKDTSLALAMVSFIHYFNWNWIGLLIPDDDQGNQFLLELKKQSGNKKICFAFVKMI--SVDDI 250

  Fly   262 V----------------------------FDSIISKLQKKPNARGVVLFTRAEDARRILQAAKRA 298
            :                            |..:|.::.:.|     ||       |||       
Mouse   251 LLEQKTEMYYQQIVMSSSNVIIIYEETINFIDLIFRMWEPP-----VL-------RRI------- 296

  Fly   299 NLSQPFHWIASDGWGKQQKLLEGLEDIAEGAITVELQSEIIADF-------------DRYMMQLT 350
                   ||.:..|.......:.......|::|.......|:.|             |.|::.  
Mouse   297 -------WITTKQWNFPTSKRDITHGTFYGSLTFLPHRGGISGFKNFVQTWFHLRSKDLYLVM-- 352

  Fly   351 PETNQRNPW-FAEYWEDTFNCVLTSLSVKPDTSNSANSTDNKIGVKAKTECDDSYRLSEKVGYEQ 414
            ||      | :.:|.....||.:..       |||:|::.:             :.:.:|.....
Mouse   353 PE------WKYFKYESLASNCKMLK-------SNSSNASFD-------------WLMEQKFDMAF 391

  Fly   415 ESKTQFVVDAVYAFAYALHNLHNDRCNTQSDQTTETRKHLQSESVWYRKISTDTKSQACPDMANY 479
            ...:..:.:|||..|:|||.::..:.:   :|..:..|...|..:   |:               
Mouse   392 SESSHNIYNAVYVVAHALHEMNLQQVD---NQAVDNGKGASSHCL---KV--------------- 435

  Fly   480 DGKEFYNNYLLNVSFIDLAGSEVKFDRQGDGLARYDILNYQRQENSSGYQYKVIGK---WFN--- 538
                  |::|..:.|.:..|.:|...::......|||.:::......|.:.| :||   :|:   
Mouse   436 ------NSFLRKIHFTNPVGDKVIMKQRVIMQEDYDIFHFENLSQHLGIKVK-LGKFSPYFSHGR 493

  Fly   539 GLQLNSETV-VWNKETEQPTSACSLPCEVGM--IKKQQGDTCCWICDSCE----SFEYVYDEFTC 596
            ...|..:.: |.....:.|:|.||..|..|.  :.|:....||::|..|.    |.|...|:  |
Mouse   494 NFHLYVDMLE
VATGSRKMPSSVCSAECSPGFRRLWKEGMAACCFVCRPCPENEISNETNMDQ--C 556

  Fly   597 KDCGPGLWPYADKLSCYALDIQYMKWNSLFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVRASG 661
            .:|....:...::..|....:.::.:.....::...:|....|.|::|:.:|.|:||||:|:|:.
Mouse   557 VNCPEYQYA
NTEQNKCIKKGVTFLSYEDPLGMVLALMAFCFSAFTAVVLCVFVKHHDTPIVKANN 621

  Fly   662 RELSYTLLFGILVCYCNTFALIAKPTIGSCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSASKS 726
            |.|||.||..::.|:..:|..|..|...:||||:...|:.|::..|.:|.||..:...| ..:..
Mouse   622 RILSYILLLSLMSCFLCSFFFIGHPNRATCVLQQITFGIVFTVAVSTVLAKTVTVVLAF-KVTDP 685

  Fly   727 AQRLKY--ISPQSQVVITTSLIAIQVLITMIWMVVEPPGTRFYYPDRR----EVILKCKIQDMSF 785
            .:||::  :|.....:|....: .|.::..||:.|.||   |...|..    .:|:.|....::.
Mouse   686 GRRLRHFLVSGTPNYIIPICSL-FQCVLCAIWLAVSPP---FVDIDEHSQHGHIIIVCNKGSVTA 746

  Fly   786 LFSQL-YNMILITICTIYAIKTRKIPENFNESKFIGFTMYTTCIIWLAFVPIYFGTGNSYEVQTT 849
            .:..| |...|.....|.|...:.:|:.|||:||:.|:|.....:|:.|:|:|..|..  :|...
Mouse   747 FYCVLGYLACLALGSFIVAFLAKNLPDTFNEAKFLTFSMLVFFSVWVTFLPVYHSTKG--KVMVA 809

  Fly   850 TLCISISLSASVALVCLYSPKVYILVFHPDKN 881
            ....||..|::..|.|:::||:||::..|::|
Mouse   810 VEIFSILASSAGMLGCIFAPKIYIILMRPERN 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_524639.2 PBP1_mGluR_groupII 39..542 CDD:380598 97/522 (19%)
NCD3G 556..605 CDD:462210 16/54 (30%)
7tmC_mGluRs_group2_3 625..876 CDD:320600 75/257 (29%)
TM helix 1 625..650 CDD:320600 5/24 (21%)
TM helix 2 662..683 CDD:320600 8/20 (40%)
TM helix 3 692..716 CDD:320600 9/23 (39%)
TM helix 4 738..758 CDD:320600 4/19 (21%)
TM helix 5 781..807 CDD:320600 5/26 (19%)
TM helix 6 815..838 CDD:320600 8/22 (36%)
TM helix 7 845..870 CDD:320600 6/24 (25%)
Vmn2r43XP_017177811.1 PBP1_pheromone_receptor 43..503 CDD:380588 98/528 (19%)
NCD3G 512..565 CDD:462210 16/54 (30%)
7tmC_V2R_pheromone 585..836 CDD:320410 75/257 (29%)
TM helix 1 585..610 CDD:320410 5/24 (21%)
TM helix 2 622..643 CDD:320410 8/20 (40%)
TM helix 3 652..676 CDD:320410 9/23 (39%)
TM helix 4 700..716 CDD:320410 2/16 (13%)
TM helix 5 743..769 CDD:320410 5/25 (20%)
TM helix 6 777..800 CDD:320410 8/22 (36%)
TM helix 7 805..830 CDD:320410 6/24 (25%)

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