DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and Grm4

DIOPT Version :10

Sequence 1:NP_524639.2 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001277974.1 Gene:Grm4 / 268934 MGIID:1351341 Length:912 Species:Mus musculus


Alignment Length:933 Identity:415/933 - (44%)
Similarity:571/933 - (61%) Gaps:79/933 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 SVSLPGDIILGGLFPVHEKG-EGAPCGPKVYNRGVQRLEAMLYAIDRVNNDPNILPGITIGVHIL 101
            |:.:.|||.||||||||.:| ||..||.....:|:.||||||:|:||:||||::||.||:|..||
Mouse    42 SIRIDGDITLGGLFPVHGRGSEGKACGELKKEKGIHRLEAMLFALDRINNDPDLLPNITLGARIL 106

  Fly   102 DTCSRDTYALNQSLQFVRASLNNLDTSGYECADGSSPQLRKNASSGPVFGVIGGSYSSVSLQVAN 166
            |||||||:||.|||.||:|.:.. |.:...|..|..|.:.|...   |.||||.|.||||:.|||
Mouse   107 DTCSRDTHALEQSLTFVQALIEK-DGTEVRCGSGGPPIITKPER---VVGVIGASGSSVSIMVAN 167

  Fly   167 LLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQSVALVDILKNFNWSYVSTIHSEGSYGE 231
            :||||.|||:|.||||..|||.:|:|.|:|.||.||:|:.|:|||::...|:||||:.|||||||
Mouse   168 ILRLFKIPQISYASTAPDLSDNSRYDFFSRVVPSDTYQAQAMVDIVRALKWNYVSTLASEGSYGE 232

  Fly   232 YGIEALHKEATER-NVCIAVAEKVPSAADDKVFDSIISKLQKKPNARGVVLFTRAEDARRILQAA 295
            .|:||..:::.|. .||||.:.|:|.......||.||.:|.:..|||.:::|...:|.||:|:||
Mouse   233 SGVEAFIQKSRENGGVCIAQSVKIPREPKTGEFDKIIKRLLETSNARAIIIFANEDDIRRVLEAA 297

  Fly   296 KRANLSQPFHWIASDGWGKQQKLLEGLEDIAEGAITVELQSEIIADFDRYMMQLTPETNQRNPWF 360
            :|||.:..|.|:.||.||.:...:..||::||||:|:..:...:..||||....|.:.|:||.||
Mouse   298 RRANQTGHFFWMGSDSWGSKSAPVLRLEEVAEGAVTILPKRTSVRGFDRYFSSRTLDNNRRNIWF 362

  Fly   361 AEYWEDTFNCVLTSLSVKPDTSNSANSTDNKIGVKAKTECDDSYRLSEKVGYEQESKTQFVVDAV 425
            ||:|||.|:|.|:..::|.             |...| :|.:..|:.:...||||.|.|||:|||
Mouse   363 AEFWEDNFHCKLSRHALKK-------------GSHIK-KCTNRERIGQDSAYEQEGKVQFVIDAV 413

  Fly   426 YAFAYALHNLHNDRCNTQSDQTTETRKHLQSESVWYRKISTDTKSQACPDMANYDGKEFYNNYLL 490
            ||..:|||.:|.|.|                          ..:...||.|...||.:.. .|:.
Mouse   414 YAMGHALHAMHRDLC--------------------------PGRVGLCPRMDPVDGTQLL-KYIR 451

  Fly   491 NVSFIDLAGSEVKFDRQGDGLARYDILNYQRQENSSGYQYKVIGKWFNGLQLNSETVVWNKETEQ 555
            ||:|..:||:.|.|:..||...||||..|||:..|:  :|||||.|.:.|.|..|.:.|....:|
Mouse   452 NVNFSGIAGNPVTFNENGDAPGRYDIYQYQRRNGSA--EYKVIGSWTDHLHLRIERMQWPGSGQQ 514

  Fly   556 -PTSACSLPCEVGMIKKQ-QGDTCCWICDSCESFEYVYDEFTCKDCGPGLWPYADKLSCYALDIQ 618
             |.|.|||||:.|..||. :|..|||.|:.|..::|..|.:|||.|...:.|..::.||..:.|.
Mouse   515 LPRSICSLPCQPGERKKTVKGMACCWHCEPCTGYQYQVDRYTCKTCPYDMRPTENRTSCQPIPIV 579

  Fly   619 YMKWNSLFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGILVCYCNTFALI 683
            .::|:|.:|::|:.:|:.|||.|..|:|.|.:.:|||:|:||||||||.||.||.:||..||.:|
Mouse   580 KLEWDSPWAVLPLFLAVVGIAATLFVVVTFVRYNDTPIVKASGRELSYVLLAGIFLCYATTFLMI 644

  Fly   684 AKPTIGSCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSASKSAQRLKYISPQSQVVITTSLIAI 748
            |:|.:|:|.|:|..:|:|.||.|:|||||||||.|||....:|....::|||.||:.||..||::
Mouse   645 AEPDLGTCSLRRIFLGLGMSISYAALLTKTNRIYRIFEQGKRSVSAPRFISPASQLAITFVLISL 709

  Fly   749 QVLITMIWMVVEPPGTRFYYPDRREV-------ILKCKIQDMSFLFSQLYNMILITICTIYAIKT 806
            |:|...:|.||:|..:...:.|:|.:       :|||.|.|:|.:....|:|:|:..||:|||||
Mouse   710 QLLGICVWFVVDPSHSVVDFQDQRTLDPRFARGVLKCDISDLSLICLLGYSMLLMVTCTVYAIKT 774

  Fly   807 RKIPENFNESKFIGFTMYTTCIIWLAFVPIYFGTGNSYE---VQTTTLCISISLSASVALVCLYS 868
            |.:||.|||:|.||||||||||:||||:||:|||..|.:   :|||||.:|:||||||:|..||.
Mouse   775 RGVPETFNEAKPIGFTMYTTCIVWLAFIPIFFGTSQSADKLYIQTTTLTVSVSLSASVSLGMLYM 839

  Fly   869 PKVYILVFHPDKNVRKLTMNSTVYRRSAAAVAQGAPTSSGYSRTHAPGTSALTGGAVGTNASSST 933
            |||||::|||::||.|       .:||..||...|..|:.:::   .|.....|     .|.|..
Mouse   840 PKVYIILFHPEQNVPK-------RKRSLKAVVTAATMSNKFTQ---KGNFRPNG-----EAKSEL 889

  Fly   934 LPTQNSPHLDEASAQTNVAHKTN 956
            .....:|.|  |:.||.|.: ||
Mouse   890 CENLEAPAL--ATKQTYVTY-TN 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_524639.2 PBP1_mGluR_groupII 39..542 CDD:380598 223/504 (44%)
NCD3G 556..605 CDD:462210 22/49 (45%)
7tmC_mGluRs_group2_3 625..876 CDD:320600 135/260 (52%)
TM helix 1 625..650 CDD:320600 10/24 (42%)
TM helix 2 662..683 CDD:320600 13/20 (65%)
TM helix 3 692..716 CDD:320600 14/23 (61%)
TM helix 4 738..758 CDD:320600 8/19 (42%)
TM helix 5 781..807 CDD:320600 11/25 (44%)
TM helix 6 815..838 CDD:320600 18/22 (82%)
TM helix 7 845..870 CDD:320600 15/27 (56%)
Grm4NP_001277974.1 PBP1_mGluR_groupIII 43..508 CDD:380599 225/511 (44%)
NCD3G 516..566 CDD:462210 22/49 (45%)
7tmC_mGluR4 586..912 CDD:320568 159/342 (46%)
TM helix 1 586..611 CDD:320568 10/24 (42%)
TM helix 2 623..644 CDD:320568 13/20 (65%)
TM helix 3 653..677 CDD:320568 14/23 (61%)
TM helix 4 699..719 CDD:320568 8/19 (42%)
TM helix 5 749..775 CDD:320568 11/25 (44%)
TM helix 6 783..806 CDD:320568 18/22 (82%)
TM helix 7 816..841 CDD:320568 15/24 (63%)

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