DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mGluR and Grm6

DIOPT Version :9

Sequence 1:NP_001259076.1 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_075209.1 Gene:Grm6 / 24419 RGDID:2747 Length:871 Species:Rattus norvegicus


Alignment Length:878 Identity:386/878 - (43%)
Similarity:532/878 - (60%) Gaps:69/878 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 SVSLPGDIILGGLFPVHEKG-EGAPCGPKVYNRGVQRLEAMLYAIDRVNNDPNILPGITIGVHIL 101
            ||.|.|.:.||||||||.:| .|..||.....:||.||||||||:||||.||.:|||:.:|..:|
  Rat    26 SVRLAGGLTLGGLFPVHARGAAGRACGALKKEQGVHRLEAMLYALDRVNADPELLPGVRLGARLL 90

  Fly   102 DTCSRDTYALNQSLQFVRASLNNL---DTSGYECADGSSPQLRKNASSGPVFGVIGGSYSSVSLQ 163
            ||||||||||.|:|.||:|.:...   |.:...| .|..|.|| :|....|..|:|.|.||||:.
  Rat    91 DTCSRDTYALEQALSFVQALIRGRGDGDEASVRC-PGGVPPLR-SAPPERVVAVVGASASSVSIM 153

  Fly   164 VANLLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQSVALVDILKNFNWSYVSTIHSEGS 228
            |||:||||.|||:|.||||..|||.||:|.|:|.||||::|:.|:|||::...|:||||:.|||:
  Rat   154 VANVLRLFAIPQISYASTAPELSDSTRYDFFSRVVPPDSYQAQAMVDIVRALGWNYVSTLASEGN 218

  Fly   229 YGEYGIEALHKEATER-NVCIAVAEKVPSAADDKVFDSIISKLQKKPNARGVVLFTRAEDARRIL 292
            |||.|:||..:.:.|. .||||.:.|:|.......|..:|.:|.:.|||||:::|...:|.||:|
  Rat   219 YGESGVEAFVQISREAGGVCIAQSIKIPREPKPGEFHKVIRRLMETPNARGIIIFANEDDIRRVL 283

  Fly   293 QAAKRANLSQPFHWIASDGWGKQQKLLEGLEDIAEGAITVELQSEIIADFDRYMMQLTPETNQRN 357
            :|.::|||:..|.|:.||.||.:...:..||:.|.||||:..:...|..||:|.|..:.|.|:||
  Rat   284 EATRQANLTGHFLWVGSDSWGSKISPILNLEEEAVGAITILPKRASIDGFDQYFMTRSLENNRRN 348

  Fly   358 PWFAEYWEDTFNCVLTSLSVKPDTSNSANSTDNKIGVKAKTECDDSYRLSEKVGYEQESKTQFVV 422
            .||||:||:.|||.|||...:.|.|.              .:|....|:.:...||||.|.|||:
  Rat   349 IWFAEFWEENFNCKLTSSGGQSDDST--------------RKCTGEERIGQDSAYEQEGKVQFVI 399

  Fly   423 DAVYAFAYALHNLHNDRCNTQSDQTTETRKHLQSESVWYRKISTDTKSQACPDMANYDGKEFYNN 487
            |||||.|:|||::|...|...:.                          .||.|...||:... :
  Rat   400 DAVYAIAHALHSMHQALCPGHTG--------------------------LCPAMEPTDGRTLL-H 437

  Fly   488 YLLNVSFIDLAGSEVKFDRQGDGLARYDILNYQR---QENSSGYQYKVIGKWFNGLQLNSETVVW 549
            |:..|.|...||:.|.|:..||...||||..||.   ..:|.|||  .:|:|...|:|:.|.:.|
  Rat   438 YIRAVRFNGSAGTPVMFNENGDAPGRYDIFQYQATNGSASSGGYQ--AVGQWAEALRLDMEVLRW 500

  Fly   550 NKET-EQPTSACSLPCEVGMIKKQ-QGDTCCWICDSCESFEYVYDEFTCKDCGPGLWPYADKLSC 612
            :.:. |.|.|.|||||..|..||. :|..|||.|::|:.:.:..|||||:.|...:.|..:...|
  Rat   501 SGDPHEVPPSQCSLPCGPGERKKMVKGVPCCWHCEACDGYRFQVDEFTCEACPGDMRPTPNHTGC 565

  Fly   613 YALDIQYMKWNSLFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGILVCYC 677
            ....:..:.|:|.:|.:|:.:|:.||..|:.::..|.:::|||:||||||||||.||.||.:.|.
  Rat   566 RPTPVVRLTWSSPWAALPLLLAVLGIMATTTIMATFMRHNDTPIVRASGRELSYVLLTGIFLIYA 630

  Fly   678 NTFALIAKPTIGSCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSASKSAQRLKYISPQSQVVIT 742
            .||.::|:|....|..:|..:|:|.::.|||||||||||.|||....:|.....:|||.||:|||
  Rat   631 ITFLMVAEPCAAICAARRLLLGLGTTLSYSALLTKTNRIYRIFEQGKRSVTPPPFISPTSQLVIT 695

  Fly   743 TSLIAIQVLITMIWMVVEPPGTRFYYPDRREV-------ILKCKIQDMSFLFSQLYNMILITICT 800
            ..|.::||:..:.|:..:||.:...|.::|.|       :|||.:.|:|.:....|:::|:..||
  Rat   696 FGLTSLQVVGVIAWLGAQPPHSVIDYEEQRTVDPEQARGVLKCDMSDLSLIGCLGYSLLLMVTCT 760

  Fly   801 IYAIKTRKIPENFNESKFIGFTMYTTCIIWLAFVPIYFGTGNSYE---VQTTTLCISISLSASVA 862
            :||||.|.:||.|||:|.||||||||||||||||||:|||..|.|   :|||||.:|:||||||:
  Rat   761 VYAIKARGVPETFNEAKPIGFTMYTTCIIWLAFVPIFFGTAQSAEKIYIQTTTLTVSLSLSASVS 825

  Fly   863 LVCLYSPKVYILVFHPDKNVRK----LTMNSTV 891
            |..||.||.|:::|||::||:|    |...||:
  Rat   826 LGMLYVPKTYVILFHPEQNVQKRKRSLKKTSTM 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_001259076.1 Periplasmic_Binding_Protein_Type_1 43..542 CDD:299141 218/506 (43%)
ANF_receptor 72..518 CDD:279440 194/449 (43%)
NCD3G 557..604 CDD:284890 21/47 (45%)
7tm_3 638..873 CDD:278433 121/244 (50%)
Grm6NP_075209.1 Periplasmic_Binding_Protein_Type_1 39..500 CDD:299141 215/505 (43%)
ANF_receptor 61..470 CDD:279440 194/451 (43%)
Glutamate binding. /evidence=ECO:0000250 169..171 1/1 (100%)
NCD3G 510..556 CDD:284890 21/45 (47%)
7tm_3 591..836 CDD:278433 121/244 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 850..871 3/9 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9DN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49358
OrthoDB 1 1.010 - - D1154468at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X509
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

Return to query results.
Submit another query.