DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and Vmn2r104

DIOPT Version :10

Sequence 1:NP_524639.2 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001098036.1 Gene:Vmn2r104 / 22313 MGIID:1316665 Length:860 Species:Mus musculus


Alignment Length:896 Identity:216/896 - (24%)
Similarity:367/896 - (40%) Gaps:137/896 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 DIILGGLFPVH----EKGEGAPCGPKVY--------NRGVQRLEAMLYAIDRVNNDPNILPGITI 96
            |:::|..||:|    ||.:.....|.||        .:..|.:.|:|:||:.:|.:|||||.|::
Mouse    43 DVMIGAFFPLHTLYTEKKKPHSTKPYVYLDYYIQYNFKNYQYILALLFAIEEINRNPNILPNISL 107

  Fly    97 GVHILDTCSRDTYALNQSLQFVRASLNNLDTSGYECADGSSPQLRKNASSGPVFGVIGGSYSSVS 161
            |....:....:...|..:.:::.|.:.......|.|.       |:|     |...:.||....|
Mouse   108 GFDFYNNEYTERNILRFTCRWLTAHVKRAMIPNYTCK-------RRN-----VIAALTGSSWITS 160

  Fly   162 LQVANLLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQSVALVDILKNFNWSYVSTIHSE 226
            .|:..||:||..||::......||||..::....:..|.||..|:|:|..:.:|:||::..|..:
Mouse   161 AQIGTLLQLFKFPQITFGPYEPTLSDDGQYSSLYQMAPKDTSLSLAIVSFMVHFSWSWIGLIIPD 225

  Fly   227 GSYGEYGIEALHKEATERNVCIAVAEKVPSAADDKVFDSIISKLQKKPNARGVVLFTRAEDARRI 291
            ...|...:....:|.....:|||..:.:|:     .:.|..::..:..:...|::.....|:..|
Mouse   226 NHKGNKILSEFREEMERNKICIAFLKMIPA-----TWTSYFTRFWENMDETNVIIIYGDIDSLEI 285

  Fly   292 LQAAKRANLSQPFHWIASDGWGKQQKLLE----GLEDIAEGAITVELQSEIIADFDRYMMQLTPE 352
            |.......|.....||.::    :..::|    .:.|...|:...........:|.:::.::.|.
Mouse   286 LMQIIGQRLLTWNIWIMNN----EPHIIELSDYFMLDSFHGSFIFRHNYRDNIEFTKFIQRVNPY 346

  Fly   353 TNQRNPWFAEYWEDTFNCVLTSLSVKPDTSNSANSTDNKIGVKAKTECDDSYRLSEKVGYEQESK 417
            ....:.:..:.|...|.|..:.:        :.:..||   .|.....|........|...:||.
Mouse   347 KYPEDIYLPKLWNFFFKCSFSDI--------NCHVLDN---CKTNASLDLLPSFIFDVVMSEEST 400

  Fly   418 TQFVVDAVYAFAYALHNLHNDRCNTQSDQTTETRKHLQSESVWYR-KISTDTKSQACPDMANYDG 481
            .  :.:.|||.|::||.:.......|:.:..|       |.|::. :::|..|.....|..|.|.
Mouse   401 N--IYNGVYALAHSLHQMRLQLLQMQAFENGE-------EMVFFPWQLNTFLKDIEVKDKRNLDW 456

  Fly   482 KEFYNNYLLNVSFIDLAGSEVKFDRQGDGLARYDILNYQRQENSSGYQYKVIGKWFNG-----LQ 541
            |:          .||               ..|||||........|.:.|:.....|.     |.
Mouse   457 KQ----------TID---------------TEYDILNLWNLPKGLGLKVKIGSFSANAPQGQQLS 496

  Fly   542 LNSETVVWNK-ETEQPTSACSLPCEVGMIKKQQGD--TCCWICDSCESFEY--VYDEFTCKDCGP 601
            |:.:.:.|.: .:|.|.|.||..|..|..|....|  .||:.|..|...|.  ..|...|..|..
Mouse   497 LSEQIIQWPEIFSEVPQSVCSESCRPGFRKVSLDDKAICCYKCTPCADNEISNETDVDQCVKCPE 561

  Fly   602 GLWPYADKLSCYALDIQYMKWNSLFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSY 666
            ..:...:|.:|:...:.::.:.....:...:||:...|||..||.:|.||.|||:|:|:.|.|||
Mouse   562 SHYANTEKSNCFPKSVSFLAYEDPLGMALASIALCLSALTVFVIGIFVKNRDTPIVKANNRTLSY 626

  Fly   667 TLLFGILVCYCNTFALIAKPTIGSCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSASKSAQRLK 731
            .||..:..|:..:...|.:|...:|:||:....|.|::..:.:|.|...:...| ..|...:.|:
Mouse   627 ILLITLTFCFLCSLNFIGQPNTAACILQQTTFAVAFTMALATVLAKAITVVLAF-KISFPGRMLR 690

  Fly   732 YI----SPQSQVVITTSLIAIQVLITMIWMVVEPP------GTRFYYPDRREVILKCK------- 779
            ::    .|:..:.|.|   .||:|:..|||...||      .|...|     :||.|.       
Mouse   691 WLMISRGPRYIIPICT---LIQLLLCGIWMATSPPFIDQDVNTEDGY-----IILLCNKGSAVAF 747

  Fly   780 ---IQDMSFLFSQLYNMILITICTIYAIKTRKIPENFNESKFIGFTMYTTCIIWLAFVPIYFGTG 841
               :..:.||....|.|         |..:|.:|:.||||||:.|:|.....:|:.|:|:|..|.
Mouse   748 HSVLGYLCFLALGSYTM---------AFLSRNLPDTFNESKFLSFSMLVFFCVWVTFLPVYHSTK 803

  Fly   842 NSYEVQTTTLCISISLSASVALVCLYSPKVYILVFHPDKN----VRKLTMN 888
            .  :|.......||..|::..|..::.||.||::..|:||    :||.|.:
Mouse   804 G--KVMVAMEVFSILASSTALLAFIFGPKCYIILLRPEKNSFNHIRKKTQS 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_524639.2 PBP1_mGluR_groupII 39..542 CDD:380598 110/519 (21%)
NCD3G 556..605 CDD:462210 16/52 (31%)
7tmC_mGluRs_group2_3 625..876 CDD:320600 79/270 (29%)
TM helix 1 625..650 CDD:320600 8/24 (33%)
TM helix 2 662..683 CDD:320600 7/20 (35%)
TM helix 3 692..716 CDD:320600 6/23 (26%)
TM helix 4 738..758 CDD:320600 7/19 (37%)
TM helix 5 781..807 CDD:320600 5/25 (20%)
TM helix 6 815..838 CDD:320600 9/22 (41%)
TM helix 7 845..870 CDD:320600 5/24 (21%)
Vmn2r104NP_001098036.1 PBP1_pheromone_receptor 45..504 CDD:380588 110/524 (21%)
NCD3G 512..565 CDD:462210 16/52 (31%)
7tmC_V2R_pheromone 585..836 CDD:320410 79/270 (29%)
TM helix 1 585..610 CDD:320410 8/24 (33%)
TM helix 2 622..643 CDD:320410 7/20 (35%)
TM helix 3 652..676 CDD:320410 6/23 (26%)
TM helix 4 700..716 CDD:320410 5/18 (28%)
TM helix 5 743..769 CDD:320410 5/34 (15%)
TM helix 6 777..800 CDD:320410 9/22 (41%)
TM helix 7 805..830 CDD:320410 5/24 (21%)

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