DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and Vmn2r107

DIOPT Version :10

Sequence 1:NP_524639.2 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001098039.1 Gene:Vmn2r107 / 22312 MGIID:1316664 Length:861 Species:Mus musculus


Alignment Length:893 Identity:208/893 - (23%)
Similarity:380/893 - (42%) Gaps:148/893 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GDIILGGLFPVH----EKGEGAPCGPKVYNRG--------VQRLEAMLYAIDRVNNDPNILPGIT 95
            ||:::|..||||    ||.......|..|..|        .|.:.|:|:||:.:|.:||:||.|:
Mouse    40 GDVMIGAFFPVHTFYTEKKRPHSTIPYQYLDGYIQYNFKNYQYILALLFAIEEINGNPNLLPNIS 104

  Fly    96 IGVHILDTCSRDTYALNQSLQFVRASLNNLDTSGYECADGSSPQLRKNASSGPVFGVIGGSYSSV 160
            :|....:....:...|..::.::.|.:.......|.|.       :.|.::     .|.|:....
Mouse   105 LGFDFYNVRFTEKETLMNTVIWLTAHVQRKVLPNYNCK-------KSNFTA-----AITGTSWIT 157

  Fly   161 SLQVANLLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQSVALVDILKNFNWSYVSTIHS 225
            |.|:..||:||..||::.......|||:.::....:..|.||..|:|:|.::.:|.||:|..|..
Mouse   158 SAQIGTLLQLFKFPQITFGPYDPFLSDRGQYPSLYQMAPKDTSLSLAIVSLMVHFRWSWVGLILP 222

  Fly   226 EGSYGEYGIEALHKEATERNVCIAVAEKVPSAADDKVFDSIISKLQKKPNARGVVLFTRAEDARR 290
            :...|...:....||...:.:|.|..:.:|:     .:.|...|..:..:...:::.....|:  
Mouse   223 DDHKGNKILSDFRKEMERKRICTAFVKMIPA-----TWTSSFVKFWENMDDTNIIIIYGDIDS-- 280

  Fly   291 ILQAAKRANLSQ---PFH-WIASDGWGKQQKLLE----GLEDIAEGAITVELQSEIIADFDRYMM 347
             |:...| |:.|   .:| |:.:    .:..::|    .:.|...|::..:.......:|.:::.
Mouse   281 -LEGLMR-NIGQRLLTWHVWVMN----IEPHIIEYDNYFMLDSFHGSLIFKHNYRENFEFTKFIR 339

  Fly   348 QLTPETNQRNPWFAEYWEDTFNCVLTSLSVKPDTSNSANSTDNKIGVKAKTECDDSYRLSEKVGY 412
            .:.|:....:.:..:.|...|.|..:.::.:...|...|::.:.:    .::..|       |..
Mouse   340 TVNPKKYPEDIYLPKMWYLFFMCSFSDINCQVLDSCQTNASLDML----PSQIFD-------VVM 393

  Fly   413 EQESKTQFVVDAVYAFAYALHNLHNDRCNTQSDQTTETRKHLQSESVWYRKISTDTKSQACPDMA 477
            .:||.:  :.:||||.|::||.:...:..||..:                               
Mouse   394 SEESTS--IYNAVYAVAHSLHEMRLQQLQTQPCE------------------------------- 425

  Fly   478 NYDGKEFY----NNYLLNVSFIDLAGSEVKFDRQGDGLARYDILNYQRQENSSGYQYKVIGKWFN 538
            |.:|.||:    |.:|.:   |::..:.:.:.::.|  |.|||||........|.:.|:...:.|
Mouse   426 NEEGMEFFPWQLNTFLKD---IEVRVNSLDWRQRID--AEYDILNLWNLPKGLGLKVKIGNFYAN 485

  Fly   539 G-----LQLNSETVVWNK-ETEQPTSACSLPCEVGM--IKKQQGDTCCWICDSCESFEY--VYDE 593
            .     |.|:.:.:.|.: .:|.|.|.||..|..|.  :..:....||:.|..|...|.  ..|.
Mouse   486 APQGQQLSLSEQMIQWPEIFSEIPQSVCSESCGPGFRKVTLENKAICCYNCTPCADNEISNETDV 550

  Fly   594 FTCKDCGPGLWPYADKLSCYALDIQYMKWNSLFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVR 658
            ..|..|....:...:|.:||...:.::.:.....:...:||:...|||:.||.:|.|:.|||:|:
Mouse   551 DQCVKCPESHYANTEKSNCYQKSVSFLGYEDPLGMALASIALCLSALTAFVIGIFVKHKDTPIVK 615

  Fly   659 ASGRELSYTLLFGILVCYCNTFALIAKPTIGSCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSA 723
            |:.:.||||||..:..|:..:...|.:|...:|:||:....|.|::..:.:|.|...:...| ..
Mouse   616 ANNQALSYTLLITLKFCFLCSLNFIGQPNTVACILQQTTFAVAFTMALATVLAKAITVVLAF-KV 679

  Fly   724 SKSAQRLKYI----SPQSQVVITTSLIAIQVLITMIWMVVEPPGTRFYYPDR------REVILKC 778
            |...:.::::    .|...:.|.|   .||:|:..|||.:.||     |.|:      ..:|:.|
Mouse   680 SFPGRMVRWLMISRGPNYIIPICT---LIQLLLCGIWMAISPP-----YIDQDAHIEHGHIIILC 736

  Fly   779 K----------IQDMSFLFSQLYNMILITICTIYAIKTRKIPENFNESKFIGFTMYTTCIIWLAF 833
            .          :..:.||....|.|         |..:|.:|:.|||||||..:|.....:|:.|
Mouse   737 NKGSAVAFHSVLGYLCFLALGSYTM---------AFLSRNLPDTFNESKFISLSMLVFFCVWITF 792

  Fly   834 VPIYFGTGNSYEVQTTTLCISISLSASVALVCLYSPKVYILVFHPDKN 881
            :|:|..|..  :|.......||..|::..|..::.||.||::..|:||
Mouse   793 LPVYHSTKG--KVMVAMEVFSILASSTALLAFIFGPKCYIILLRPEKN 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_524639.2 PBP1_mGluR_groupII 39..542 CDD:380598 109/527 (21%)
NCD3G 556..605 CDD:462210 14/52 (27%)
7tmC_mGluRs_group2_3 625..876 CDD:320600 76/270 (28%)
TM helix 1 625..650 CDD:320600 8/24 (33%)
TM helix 2 662..683 CDD:320600 7/20 (35%)
TM helix 3 692..716 CDD:320600 6/23 (26%)
TM helix 4 738..758 CDD:320600 7/19 (37%)
TM helix 5 781..807 CDD:320600 5/25 (20%)
TM helix 6 815..838 CDD:320600 9/22 (41%)
TM helix 7 845..870 CDD:320600 5/24 (21%)
Vmn2r107NP_001098039.1 PBP1_pheromone_receptor 43..501 CDD:380588 108/531 (20%)
NCD3G 509..562 CDD:462210 14/52 (27%)
7tmC_V2R_pheromone 582..833 CDD:320410 76/270 (28%)
TM helix 1 582..607 CDD:320410 8/24 (33%)
TM helix 2 619..640 CDD:320410 7/20 (35%)
TM helix 3 649..673 CDD:320410 6/23 (26%)
TM helix 4 697..713 CDD:320410 5/18 (28%)
TM helix 5 740..766 CDD:320410 5/34 (15%)
TM helix 6 774..797 CDD:320410 9/22 (41%)
TM helix 7 802..827 CDD:320410 5/24 (21%)

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