DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and F35H10.10

DIOPT Version :9

Sequence 1:NP_001259076.1 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_501400.1 Gene:F35H10.10 / 177627 WormBaseID:WBGene00018073 Length:1404 Species:Caenorhabditis elegans


Alignment Length:1009 Identity:200/1009 - (19%)
Similarity:370/1009 - (36%) Gaps:260/1009 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VSLPG--DIILGGLFPVHEKGEGAPCG---------PKVYNRGV----QRLEAMLYAIDRVNNDP 88
            :|:|.  .:.|.|||.:|   .|..|.         |..:...|    ||...:           
 Worm   523 LSIPRHYPLYLVGLFDLH---SGQTCQSMAHTDISLPMAFVHTVWTFKQRFPQL----------- 573

  Fly    89 NILPGITIGVHILDTCSRDTYAL-------NQSLQFVRASLN----NLDTSGYECA-DGSSPQLR 141
            .:|..:..|..::|:||....|:       .|..:|.:|..|    .....||..| .|.|.:..
 Worm   574 GLLKDLDFGALLIDSCSSGKQAIESVVRSETQCFRFNQAGRNITIVPKSVFGYASALHGDSQESL 638

  Fly   142 KNASSGPVFGVIGGSYSSVSLQVANLLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQSV 206
            |...|.   |....|..||..:.:.|.|.|         ||               :|....|::
 Worm   639 KGYFSS---GDTDASLVSVDSEHSALQRSF---------TA---------------LPSSRNQAL 676

  Fly   207 ALVDILKNFNWSYVSTIHSEGSYGEYGI-EALHKEATERNVCIAVAEKVPSAADDKVFDSIISKL 270
            ||:.:|....|.:|:...||.......: .|..:.|.:|.||:|....:..:..|.:        
 Worm   677 ALLKLLNRMQWQFVTAALSEQDPESLSLFRAFERLALDRGVCLAEVLNIGGSRLDNI-------- 733

  Fly   271 QKKPNARGVVLFTRAEDARRILQAAK-RAN-----LSQPFHWIASDGWGKQQKLLEGLEDIAEGA 329
              :......::|:.|.||...|.|:| |.|     :.:...|.......|         ::..|.
 Worm   734 --RSTTNVTIVFSTARDAADYLIASKIRGNHVNVMMGEAHDWYLHAPNNK---------ELFPGT 787

  Fly   330 ITVELQSEIIADFDRYMMQLTPETNQRNPWFAEYWEDTFNCVLTSLSVKPDTSNSANSTDNKIGV 394
            ::|:.::.:..||..::...||.| ....|:..|.|..:.|.|              |..:|: :
 Worm   788 VSVQPRNILYGDFREWLETTTPLT-LPELWYWSYIESRYGCAL--------------SQKSKV-I 836

  Fly   395 KAKTECDDSYRLSEKVGYEQESKTQFVVDAVYAFAYALHNLHNDRCNTQSDQTTE----TRKHLQ 455
            ..|....|.....|.:|  :.:|..::...|..|.:|:.:::...|..|:....|    .|:.:.
 Worm   837 YGKMCTGDELLNIESLG--RMTKAGYLSRGVERFLFAMDSVYKSLCPAQNGLCLEFYEQGRRQIL 899

  Fly   456 SESVWYRKISTDTKSQACPDMANYDGKEFYNNYLLNVSFIDLAGSEVKFDRQGDGLARYDILNYQ 520
            ::   .:|.||:            |..|.|       .|:.                  ||.|: 
 Worm   900 TQ---LKKTSTE------------DDVEIY-------EFLP------------------DINNH- 923

  Fly   521 RQENSSGYQYKVIGKW--FNGLQL-----NSETVVWNKETEQPTSACSL-------PCEVGMIKK 571
                   :.|.:|..|  ..||::     |...|....:.:.|...|.|       |.:..:.:.
 Worm   924 -------FTYHLIANWTLTTGLRMTNQYRNGNGVPTESKCQPPMCKCFLDGDFFQRPLDSFVFRP 981

  Fly   572 QQ---GDTCCWI----CDSCESFEY--VYDEFTCKDCGPGLW---PYADKLSCYALDIQYMKWNS 624
            .:   .|...:|    ....|..||  |::..|     .|.|   |:           .|:    
 Worm   982 DEPEGSDQSSYIKRQPAFGSEKIEYQSVFEHIT-----TGHWRDHPH-----------NYV---- 1026

  Fly   625 LFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGILVCYCNTFALIAKPTIG 689
            |.|||.:.:.:....|..:::.|:.:      |....:.|..:||.||::.|...|..:..||..
 Worm  1027 LLALITVLVVVAIAVLVLVLVKLYLR------VVKGNQSLGISLLIGIIILYSTAFFFVFDPTDS 1085

  Fly   690 SCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSASKSAQRLKY-----ISPQSQVVITTSLIAIQ 749
            .|.|:....|:|::|.:..::.|..::        ::|:.|.:     ||..:..::...::.:|
 Worm  1086 VCRLRVILHGLGYTICFGVMIAKATQL--------RNAETLGFGTAIHISFWNYWLLLFFIVGVQ 1142

  Fly   750 VLITMIWMVVEPPGTRFYYPDRREVILKCKIQDMSFLFSQLYNMILITICTIYAIKTRKIPENFN 814
            :.:::.|. :||..:.....|.....:.|.:..:.|:.|..|.||||.:....::..|.|..|:.
 Worm  1143 IALSISWF-LEPFMSTIGVIDTNVQRMMCTMGKVEFVVSNFYVMILIFMALFISMLNRNIKRNYK 1206

  Fly   815 ESKFIGFTMYTTCIIWLAFVPIYFGTGNSYEVQTTTLCISISLSASVALVCLYSPKVYILVFH-- 877
            |:|::.::.......|:|::.:|...  .:|.:.|.:.:.:...|::.|..|:.||:|||:.:  
 Worm  1207 ETKWLLYSTVLCFFTWVAWITLYLVL--DHEFRDTVIVVELVACATILLGFLFGPKIYILLSYEP 1269

  Fly   878 --------PDKNVRKLTMNSTVYRR-----SAAAVAQGAPTSSGYSRTHAPGTSALTG-----GA 924
                    |..|      ::.::.:     |..||:..:.|||..:|: :.|:|..:.     .|
 Worm  1270 VVVAFKRDPFPN------HTDLFEKDDDLPSQRAVSPASSTSSSSNRS-SSGSSYTSSSKRPVNA 1327

  Fly   925 VGTNASSSTLPTQNSPHLDEASAQTNVAHKTNGE 958
            ||....:..:..| ||.......:.....::|.|
 Worm  1328 VGPLPLNKNVEDQ-SPIFHTVMRKKTKVRRSNSE 1360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_001259076.1 Periplasmic_Binding_Protein_Type_1 43..542 CDD:299141 105/538 (20%)
ANF_receptor 72..518 CDD:279440 90/468 (19%)
NCD3G 557..604 CDD:284890 11/62 (18%)
7tm_3 638..873 CDD:278433 50/239 (21%)
F35H10.10NP_501400.1 PBP1_GPCR_family_C-like 57..354 CDD:380573
PBP1_GPCR_family_C-like 532..809 CDD:380573 68/336 (20%)
7tm_classC_mGluR-like <1072..1266 CDD:320091 45/204 (22%)
TM helix 3 1088..1112 CDD:320091 5/23 (22%)
TM helix 4 1131..1150 CDD:320091 1/18 (6%)
TM helix 5 1173..1199 CDD:320091 7/25 (28%)
TM helix 6 1207..1230 CDD:320091 4/22 (18%)
TM helix 7 1237..1260 CDD:320091 4/22 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24060
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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