DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and mgl-3

DIOPT Version :9

Sequence 1:NP_001259076.1 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001076735.3 Gene:mgl-3 / 177327 WormBaseID:WBGene00021152 Length:1008 Species:Caenorhabditis elegans


Alignment Length:946 Identity:337/946 - (35%)
Similarity:518/946 - (54%) Gaps:98/946 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VSLPGDIILGGLFPVHEKGEGA--PCGPKVYNRGVQRLEAMLYAIDRVNNDPNILPGITIGVHIL 101
            :::||.|:||||||:||.|..|  .||....::||||:.|||:|:::||.|..:||..::|..||
 Worm    39 LTVPGQIVLGGLFPIHEAGRNASHQCGKIKADQGVQRMVAMLFALEKVNRDRQLLPQASLGAQIL 103

  Fly   102 DTCSRDTYALNQSLQFVRASLNNLDTSGYECADGSSPQLRKNASSGPVFGVIGGSYSSVSLQVAN 166
            ||||.|:|||.|:|:|:::.::|.|  |..|||||:....:.    ||..|:|.:.|.||:.||:
 Worm   104 DTCSVDSYALEQTLEFIKSVMSNGD--GVTCADGSTGSYTRQ----PVVAVVGAAGSQVSVMVAS 162

  Fly   167 LLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQSVALVDILKNFNWSYVSTIHSEGSYGE 231
            :|:||.|||||.:||...||:|.||..|:|.||||..|:..:..::....|:||..|...|||||
 Worm   163 MLQLFKIPQVSYSSTGAELSEKPRFAFFSRVVPPDNLQAQVMARVIGALEWTYVHAIADTGSYGE 227

  Fly   232 YGIEALHKEATERNVCI-AVAEKVPSAADDKVFDSIISKLQKKPNARGVVLFTRAEDARRILQ-- 293
            .|:::....|.|..:|| ...:|:.....:|.|..::.::.:...|||||:|...::.:|:|:  
 Worm   228 RGMDSFRAAAAENGICIDGDVQKISRRWTEKNFRDLLIRMHRTRKARGVVMFVDEDNLKRLLKTL 292

  Fly   294 ----AAKRANLSQPFHWIASDGWGKQQKLLEGLEDIAEGAITVELQSEIIADFDRYMMQLTPETN 354
                |.....|.:.|.::|||.||.:|.::.|||....||||:.........:..|...|:|   
 Worm   293 DLLVAEGHTELDRHFWFVASDSWGIKQSVVRGLEHRTYGAITIAPMVREETGYLEYFRSLSP--- 354

  Fly   355 QRNPWFAEYWEDTFNCVLTSLSVKPDTSNSANSTDNKIGVKAKTECDDSYRLSEKVGYEQESKTQ 419
             :...|.|.:.:...|..|                  :.||...:|.|...::.|    |||...
 Worm   355 -KGFVFLEEFFEYLGCSAT------------------VDVKTFGDCFDMVNITLK----QESYVP 396

  Fly   420 FVVDAVYAFAYALHNLHNDRCNTQSDQTTETRKHLQSESVWYRKISTDTKSQACPDMANYDGKEF 484
            ||||.|...|.|:.....|.|.                .:.:.|.   |.:|     :.:.| |.
 Worm   397 FVVDTVKIIAKAISMYIEDDCG----------------KIPFHKC---TLAQ-----SGFRG-ER 436

  Fly   485 YNNYLLNVSFIDLAGSEVKFDRQGDGLARYDILNYQRQENSSGYQYKVIGKWFNG---LQLNSET 546
            ...|..|:|.|  .......|..|||:.|||:  :|...|.   .|:.:|||.:.   |.:..|.
 Worm   437 LQRYYRNMSLI--KNEPALIDANGDGIGRYDV--FQLDING---VYQKVGKWRSTDDFLSVEVEK 494

  Fly   547 VVWNKET---EQPTSACSLPCEVGMIKKQQGDTCCWICDSCESFEYVYDEFTCKDCGPGLWPYAD 608
            :....:|   |:|.|.||..|..|..:..|..||||.|..|::...:::|.:|::|..|:.|...
 Worm   495 IRHAFKTAHGERPMSVCSTDCPRGHYRAYQDQTCCWACIPCDTSTSIHNETSCEECAVGMVPDRT 559

  Fly   609 KLSCYALDIQYMKWNSLFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGIL 673
            ...|..:....|:|::.::|||.|.:..|||.|..|:.:|.|..:||::.||||||.|.::.||.
 Worm   560 LHFCVPIPPVSMQWDTTWSLIPAAFSTLGIASTIFVVSVFLKFSNTPVIMASGRELCYCMMSGIG 624

  Fly   674 VCYCNTFALIAKPTIGSCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSASKSAQRLKYISPQSQ 738
            :||..||.|:::||:.:|.:.|..:|:..|.||:|::|||||::|:|  ...||||.::|:|::|
 Worm   625 MCYTLTFFLVSQPTVITCSMTRILMGLSMSAIYAAIITKTNRLARVF--KPDSAQRPRFITPKAQ 687

  Fly   739 VVITTSLIAIQVLITMIWMVVEPPGTRFYYPDRREVILKCKIQDMSFLFSQLYNMILITICTIYA 803
            |.|...::::|::.|.:|::.:||||...:|.|.|.:|.||......|.|.|||::||..||:||
 Worm   688 VGICMGIVSVQLIGTFVWILFDPPGTMIVFPTRTEAVLTCKATTSHLLISLLYNILLIVACTVYA 752

  Fly   804 IKTRKIPENFNESKFIGFTMYTTCIIWLAFVPIYFGTGNSYEVQTTTLCISISLSASVALVCLYS 868
            .|||||||||||::.||||||:|||:||||.||||.|.:.:.:|.|:||:.||||.:|||:|.::
 Worm   753 FKTRKIPENFNETRHIGFTMYSTCILWLAFGPIYFATQSDFRIQITSLCMCISLSGTVALICFFA 817

  Fly   869 PKVYILVFHPDKNVRKLTMNSTVYR------RSAAAVAQGAPTSSGY-----SRTHAPGTSALTG 922
            |||||::|.|.||||  |..|.|.|      |..:.:.......:.|     ::::.|..||...
 Worm   818 PKVYIVLFQPYKNVR--TRQSAVGRLVNQQMRFMSQLTYNPDGCNSYQPMSSNQSYKPSISAEES 880

  Fly   923 GAVGTNASSSTLPTQN-SPH-LDEASAQTNVAHKTN 956
            .  .|:.:....||:. .|| :::.:|...::.|.:
 Worm   881 S--HTSNAQVQQPTRAIPPHVIEQLAASLPISDKND 914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_001259076.1 Periplasmic_Binding_Protein_Type_1 43..542 CDD:299141 168/510 (33%)
ANF_receptor 72..518 CDD:279440 145/452 (32%)
NCD3G 557..604 CDD:284890 16/46 (35%)
7tm_3 638..873 CDD:278433 115/234 (49%)
mgl-3NP_001076735.3 Periplasmic_Binding_Protein_type1 41..493 CDD:385651 169/515 (33%)
NCD3G 507..556 CDD:369426 17/48 (35%)
7tmC_mGluRs_group2_3 577..825 CDD:320600 122/249 (49%)
TM helix 1 577..601 CDD:320600 10/23 (43%)
TM helix 2 613..634 CDD:320600 10/20 (50%)
TM helix 3 643..665 CDD:320600 8/21 (38%)
TM helix 4 689..705 CDD:320600 3/15 (20%)
TM helix 5 730..753 CDD:320600 10/22 (45%)
TM helix 6 762..787 CDD:320600 18/24 (75%)
TM helix 7 794..819 CDD:320600 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X509
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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