DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and Grm2

DIOPT Version :10

Sequence 1:NP_524639.2 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:NP_001153825.1 Gene:Grm2 / 108068 MGIID:1351339 Length:872 Species:Mus musculus


Alignment Length:914 Identity:438/914 - (47%)
Similarity:574/914 - (62%) Gaps:98/914 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VSLPGDIILGGLFPVHEKGEGA-PCGPKVYNRGVQRLEAMLYAIDRVNNDPNILPGITIGVHILD 102
            ::|.||::||||||||:||..| .|||...:||:|||||||:|:||:|.||::|||:.:|.||||
Mouse    26 LTLEGDLVLGGLFPVHQKGGPAEECGPVNEHRGIQRLEAMLFALDRINRDPHLLPGVRLGAHILD 90

  Fly   103 TCSRDTYALNQSLQFVRASLN-NLDTSGYECADGSSPQLRKNASSGP--VFGVIGGSYSSVSLQV 164
            :||:||:||.|:|.||||||: ..|.|.:.|.|||...|    |..|  :.||||||||.||:||
Mouse    91 SCSKDTHALEQALDFVRASLSRGADGSRHICPDGSYATL----SDAPTAITGVIGGSYSDVSIQV 151

  Fly   165 ANLLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQSVALVDILKNFNWSYVSTIHSEGSY 229
            |||||||.|||:|.|||:..||||:|:|.||||||||.||:.|:.:||:.|||:||||:.|||.|
Mouse   152 ANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFFQAKAMAEILRFFNWTYVSTVASEGDY 216

  Fly   230 GEYGIEALHKEATERNVCIAVAEKVPSAADDKVFDSIISKLQKKPNARGVVLFTRAEDARRILQA 294
            ||.||||...||..||:|:|.:|||..|.....|:.::..|.:||:||..|||||:||||.:|.|
Mouse   217 GETGIEAFELEARARNICVATSEKVGRAMSRAAFEGVVRALLQKPSARVAVLFTRSEDARELLAA 281

  Fly   295 AKRANLSQPFHWIASDGWGKQQKLLEGLEDIAEGAITVELQSEIIADFDRYMMQLTPETNQRNPW 359
            .:|.|.|  |.|:||||||..:.::.|.|..||||||:||.|..|:||..|...|.|..|.||||
Mouse   282 TQRLNAS--FTWVASDGWGALESVVAGSERAAEGAITIELASYPISDFASYFQNLDPWNNSRNPW 344

  Fly   360 FAEYWEDTFNCVLTSLSVKPDTSNSANSTDNKIGVKAKTECDDSYRLSEKVGYEQESKTQFVVDA 424
            |.|:||:.|.|   |...:...::|..:                      |.:|||||..|||:|
Mouse   345 FREFWEERFRC---SFRQRDCAAHSLRA----------------------VPFEQESKIMFVVNA 384

  Fly   425 VYAFAYALHNLHNDRC-NTQSDQTTETRKHLQSESVWYRKISTDTKSQACPDMANYDGKEFYNNY 488
            |||.|:||||:|...| ||                           ::.|..|...:|:..|.::
Mouse   385 VYAMAHALHNMHRALCPNT---------------------------TRLCDAMRPVNGRRLYKDF 422

  Fly   489 LLNVSFIDL------AGSEVKFDRQGDGLARYDILNYQRQENSSGYQYKVIGKWFNGLQLNSETV 547
            :|||.| |.      ...||:|||.|||:.||:|..|.|..|.. |:|:.:|.|..||.|::..:
Mouse   423 VLNVKF-DAPFRPADTDDEVRFDRFGDGIGRYNIFTYLRAGNGR-YRYQKVGYWAEGLTLDTSII 485

  Fly   548 VWNKET--EQPTSACSLPCEVGMIKK-QQGDTCCWICDSCESFEYVYDEFTCKDCGPGLWPYADK 609
            .|...:  ..|.|.||.||....:|. |.|:.|||:|..|:.:||..|||||.|||.|.||.|..
Mouse   486 PWASPSAGTLPASRCSEPCLQNEVKSVQPGEVCCWLCIPCQPYEYRLDEFTCADCGLGYWPNASL 550

  Fly   610 LSCYALDIQYMKWNSLFALIPMAIAIFGIALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGILV 674
            ..|:.|..:|::|...:|:.|:.||..|...|..|:.:|.:::.||:|:||||||.|.||.|:.:
Mouse   551 TGCFELPQEYIRWGDAWAVGPVTIACLGALATLFVLGVFVRHNATPVVKASGRELCYILLGGVFL 615

  Fly   675 CYCNTFALIAKPTIGSCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSASKSAQRLKYISPQSQV 739
            |||.||..||||:...|.|:|.|:|..||:.|||||||||||:|||..|.:.|||.::|||.|||
Mouse   616 CYCMTFIFIAKPSTAVCTLRRLGLGTAFSVCYSALLTKTNRIARIFGGAREGAQRPRFISPASQV 680

  Fly   740 VITTSLIAIQVLITMIWMVVEPPGT-RFYYPDRREVI-LKCKIQDMSFLFSQLYNMILITICTIY 802
            .|..:||:.|:||...|:|||.||. :...|:||||: |:|..:|.|.|.|..||::||.:||:|
Mouse   681 AICLALISGQLLIVAAWLVVEAPGIGKETAPERREVVTLRCNHRDASMLGSLAYNVLLIALCTLY 745

  Fly   803 AIKTRKIPENFNESKFIGFTMYTTCIIWLAFVPIYFGTGNSYEVQTTTLCISISLSASVALVCLY 867
            |.||||.||||||:|||||||||||||||||:||::.|.:.|.|||||:|:|:|||.||.|.||:
Mouse   746 AFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIFYVTSSDYRVQTTTMCVSVSLSGSVVLGCLF 810

  Fly   868 SPKVYILVFHPDKNVRKLTMNSTVYRRSAAAVAQGAPTSSGYSRTHAPGTSALTGGAVGTNASSS 932
            :||::|::|.|.|||                |:..||||...|.  ||..||    .:|..:.|.
Mouse   811 APKLHIILFQPQKNV----------------VSHRAPTSRFGSA--APRASA----NLGQGSGSQ 853

  Fly   933 TLPT 936
            .:||
Mouse   854 LVPT 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_524639.2 PBP1_mGluR_groupII 39..542 CDD:380598 244/513 (48%)
NCD3G 556..605 CDD:462210 25/49 (51%)
7tmC_mGluRs_group2_3 625..876 CDD:320600 141/252 (56%)
TM helix 1 625..650 CDD:320600 8/24 (33%)
TM helix 2 662..683 CDD:320600 12/20 (60%)
TM helix 3 692..716 CDD:320600 15/23 (65%)
TM helix 4 738..758 CDD:320600 9/19 (47%)
TM helix 5 781..807 CDD:320600 13/25 (52%)
TM helix 6 815..838 CDD:320600 20/22 (91%)
TM helix 7 845..870 CDD:320600 15/24 (63%)
Grm2NP_001153825.1 PBP1_mGluR_groupII 26..480 CDD:380598 244/513 (48%)
NCD3G 496..546 CDD:462210 25/49 (51%)
7tmC_mGluR2 566..819 CDD:320563 141/252 (56%)
TM helix 1 566..591 CDD:320563 8/24 (33%)
TM helix 2 603..624 CDD:320563 12/20 (60%)
TM helix 3 633..657 CDD:320563 15/23 (65%)
Important for interaction with HTR2A. /evidence=ECO:0000250 677..685 4/7 (57%)
TM helix 4 679..699 CDD:320563 9/19 (47%)
TM helix 5 724..750 CDD:320563 13/25 (52%)
TM helix 6 758..781 CDD:320563 20/22 (91%)
TM helix 7 788..813 CDD:320563 15/24 (63%)

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