DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mGluR and grm8

DIOPT Version :9

Sequence 1:NP_001259076.1 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_012815421.1 Gene:grm8 / 100497088 XenbaseID:XB-GENEPAGE-22062955 Length:919 Species:Xenopus tropicalis


Alignment Length:968 Identity:428/968 - (44%)
Similarity:575/968 - (59%) Gaps:88/968 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KNNNGTILVVVMVLSWSRVVDLKSPSNTHTQD-SVSVSLPGDIILGGLFPVHEKGE-GAPCGPKV 66
            |:...||...::.|:...:........|:.|: :.|:.:.||||||||||||.:|| |.|||...
 Frog     9 KSTQSTICPCILFLTMYILGISSMMQTTNGQEYAHSIRVEGDIILGGLFPVHARGERGVPCGDLK 73

  Fly    67 YNRGVQRLEAMLYAIDRVNNDPNILPGITIGVHILDTCSRDTYALNQSLQFVRASLNNLDTSGYE 131
            ..:|:.|||||:||||::|.|.::||.||:||.||||||||||||.|||.||:|.:.. |.|...
 Frog    74 KEKGIHRLEAMMYAIDQINKDSDLLPNITLGVRILDTCSRDTYALEQSLTFVQALIEK-DASDVR 137

  Fly   132 CADGSSPQLRKNASSGPVFGVIGGSYSSVSLQVANLLRLFHIPQVSPASTAKTLSDKTRFDLFAR 196
            ||:|..|...|   ...:.||||.:.||||:.|||:||||.|||:|.||||..|||.:|:|.::|
 Frog   138 CANGDPPIFTK---PDKIVGVIGAAASSVSIMVANILRLFKIPQISYASTAPELSDNSRYDFYSR 199

  Fly   197 TVPPDTFQSVALVDILKNFNWSYVSTIHSEGSYGEYGIEALHKEATE-RNVCIAVAEKVPSAADD 260
            .||||::|:.|:|||:....|:||||:.|||:|||.|:||..:.:.| ..||||.:.|:|.....
 Frog   200 VVPPDSYQAQAMVDIVTALGWNYVSTLASEGNYGESGVEAFTQLSREIGGVCIAQSLKIPREPKV 264

  Fly   261 KVFDSIISKLQKKPNARGVVLFTRAEDARRILQAAKRANLSQPFHWIASDGWGKQQKLLEGLEDI 325
            ..||.||.:|.:.||||.:::|...:|.||||:||||.|.:..|.||.||.||.:...:...|:|
 Frog   265 GEFDKIIRRLLETPNARAIIIFANEDDIRRILEAAKRNNQTGHFLWIGSDSWGSKIAPVYQQEEI 329

  Fly   326 AEGAITVELQSEIIADFDRYMMQLTPETNQRNPWFAEYWEDTFNCVLTSLSVKPDTSNSANSTDN 390
            ||||:|:..:...|..||||....:...|:||.||||:||:.|.|                    
 Frog   330 AEGAVTILPKRASIDGFDRYFRSRSLANNRRNVWFAEFWEENFGC-------------------- 374

  Fly   391 KIGVKAK-----TECDDSYRLSEKVGYEQESKTQFVVDAVYAFAYALHNLHNDRCNTQSDQTTET 450
            |:|...|     .:|....|:.....:|||.|.|||:||||:.|:||:|:|.|.|.....     
 Frog   375 KLGSHGKRNNHFKKCTGLERIGRHSSFEQEGKVQFVIDAVYSMAHALNNMHKDLCPGYIG----- 434

  Fly   451 RKHLQSESVWYRKISTDTKSQACPDMANYDGKEFYNNYLLNVSFIDLAGSEVKFDRQGDGLARYD 515
                                 .||.|...||||.. :|:..|:|...||:.|.|:..||...|||
 Frog   435 ---------------------LCPRMKTIDGKELL-SYIRAVNFNGSAGTPVTFNENGDAPGRYD 477

  Fly   516 ILNYQRQENSSGYQYKVIGKWFNGLQLNSETVVW-NKETEQPTSACSLPCEVGMIKKQ-QGDTCC 578
            |..||....::  :|||||:|.|.|.||.|.:.| ::|..||||.|||||:.|..||. :|..||
 Frog   478 IYQYQMTNKTA--EYKVIGQWTNQLHLNVEDMQWTSREHTQPTSVCSLPCKPGERKKTVKGVPCC 540

  Fly   579 WICDSCESFEYVYDEFTCKDCGPGLWPYADKLSCYALDIQYMKWNSLFALIPMAIAIFGIALTSI 643
            |.|:.||.:.|..||.||:.|.....|.|::..|..:.|..::|:|.:|::|:.|||.||..|:.
 Frog   541 WHCERCEGYHYQVDELTCELCPLDQKPNANRTGCQLIPIIKLEWHSPWAVVPVFIAILGIVATTF 605

  Fly   644 VIVLFAKNHDTPLVRASGRELSYTLLFGILVCYCNTFALIAKPTIGSCVLQRFGIGVGFSIIYSA 708
            |||.|.:.:|||:||||||||||.||.||.:||..||.:|..|.:..|.|:|..:|:|....|:|
 Frog   606 VIVTFVRYNDTPIVRASGRELSYVLLTGIFLCYAITFLMIGTPDMFVCSLRRIFLGLGMCFSYAA 670

  Fly   709 LLTKTNRISRIFHSASKSAQRLKYISPQSQVVITTSLIAIQVLITMIWMVVEPPGTRFYYPDRR- 772
            ||||||||.|||....||....|:|||.||:|||.|||::|::...||.||:||.....|.::| 
 Frog   671 LLTKTNRIHRIFEQGKKSVTAPKFISPASQLVITFSLISVQLIGVFIWFVVDPPHIIIDYGEQRT 735

  Fly   773 ------EVILKCKIQDMSFLFSQLYNMILITICTIYAIKTRKIPENFNESKFIGFTMYTTCIIWL 831
                  ..:|||.|.::|.:.|..|:::|:..||:||||||.:||.|||:|.|||||||||||||
 Frog   736 PDPINARGVLKCDISELSLICSLGYSILLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIIWL 800

  Fly   832 AFVPIYFGTGNSYE---VQTTTLCISISLSASVALVCLYSPKVYILVFHPDKNVRKLTMNSTVYR 893
            ||:||:|||..|.|   :|||||.||:||||||:|..||.|||||::.||::||:|       .:
 Frog   801 AFIPIFFGTAQSAERMYIQTTTLTISMSLSASVSLGMLYMPKVYIIILHPEQNVQK-------RK 858

  Fly   894 RSAAAVAQGAPTSS-----GYSRTHAPGTSALTGGAVGTNASSSTLPTQNSPHLDEAS 946
            ||..||...|...|     |..|.:....:.|. .::.||....:  |||.|:..:.|
 Frog   859 RSFKAVVTAATMQSKLIQKGNDRPNGEVKTELC-ESLETNRRRPS--TQNKPYFPDPS 913

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_001259076.1 Periplasmic_Binding_Protein_Type_1 43..542 CDD:299141 223/505 (44%)
ANF_receptor 72..518 CDD:279440 194/451 (43%)
NCD3G 557..604 CDD:284890 23/47 (49%)
7tm_3 638..873 CDD:278433 133/244 (55%)
grm8XP_012815421.1 PBP1_mGluR_groupIII 49..509 CDD:107371 226/512 (44%)
ANF_receptor 79..478 CDD:279440 192/449 (43%)
NCD3G 518..565 CDD:284890 23/46 (50%)
7tm_3 600..845 CDD:278433 133/244 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I12003
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X509
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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