DRSC/TRiP Functional Genomics Resources

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Protein Alignment mGluR and vn2r1p

DIOPT Version :9

Sequence 1:NP_001259076.1 Gene:mGluR / 43838 FlyBaseID:FBgn0019985 Length:976 Species:Drosophila melanogaster
Sequence 2:XP_012818896.1 Gene:vn2r1p / 100496607 XenbaseID:XB-GENE-876508 Length:908 Species:Xenopus tropicalis


Alignment Length:951 Identity:255/951 - (26%)
Similarity:443/951 - (46%) Gaps:150/951 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 DIILGGLFPVH-------EKGEGAPCGPKV--YN-RGVQRLEAMLYAIDRVNNDPNILPGITIGV 98
            ::|:||:||.|       :.....|..||.  :| |.::...||::||:::|...:|||.||:|.
 Frog    45 ELIIGGMFPFHFRTILQNDSAMEEPKSPKCEGFNFRSLRWARAMIFAINKINKQRDILPNITLGY 109

  Fly    99 HILDTCSRDTYALNQSLQFVRASLNNLDTSGYECADGSSPQLRKNASSGPVFGVIGGSYSSVSLQ 163
            .|.|||...:.|:..:|.|:..  .|.....:.|:.|:           |:..|:|...|::|:.
 Frog   110 QIFDTCFTISKAVEGTLSFLTG--QNETHPNFRCSAGA-----------PLAAVVGAGGSALSIA 161

  Fly   164 VANLLRLFHIPQVSPASTAKTLSDKTRFDLFARTVPPDTFQSVALVDILKNFNWSYVSTIHSEGS 228
            .|.:|.|::.|||..||:...||||.:|..|.||:..||.||..:..::..|.|::|.||.::..
 Frog   162 TARILGLYYFPQVGYASSCSVLSDKFQFPSFLRTIASDTTQSKGIAALVTYFGWTWVGTIAADDD 226

  Fly   229 YGEYGIEALHKEATERN-VCIAVAEKVPSAADDKVFDSIISKLQKKPNARGVVLFTRAEDARRIL 292
            ||:|||: |.||..|:| |||:.:|.:|...:....|.|::.: :|..|..:|:|:...|...::
 Frog   227 YGKYGIK-LFKEEVEKNGVCISFSETLPRIYNKDSIDKIVATI-RKSTANIIVIFSSDIDLSSLM 289

  Fly   293 QAAKRANLSQPFHWIASDGWGKQQKLLEGLE-DIAEGAITVELQSEIIADFDRYMMQLTPETNQR 356
            :|....|::.. .:|:|:.|.....:.:... ....|.|...:|...|..|:.::..:.|| :..
 Frog   290 EALAETNITGK-TYISSEAWTTSALIAKPKHFHFLGGTIGFAVQRASIPGFEEFLHDIHPE-HGN 352

  Fly   357 NPWFAEYWEDTFNCV--------LTSLSV-------KPDTSNSANSTDNKIGVKAKTECDDSYRL 406
            :....|:||:.|||.        .|::|:       |.|.|....:....:.....|..|    :
 Frog   353 DDLVYEFWEEAFNCTWPTNRALFYTNISLEAAMAGRKRDVSPIPCTGRENLNTSLNTYSD----V 413

  Fly   407 SE-KVGYEQESKTQFVVDAVYAFAYALHNLHNDRCNTQSDQTTETRKHLQSESVWYRKISTDTKS 470
            || ::.|.       |..|||..|:|||:|  |.|         ..||            ....:
 Frog   414 SELRITYN-------VYKAVYTIAHALHDL--DVC---------VPKH------------GPFPN 448

  Fly   471 QACPDMANYDGKEFYNNYLLNVSFIDLAGSEVKFDRQGDGLARYDILNYQRQEN----------- 524
            ..|.::.:::..:.. .||....|..|....:.||..||....||:||:|.::|           
 Frog   449 NECANVLDFEPWQLM-YYLKKAKFTSLNNETISFDDSGDIKGHYDVLNWQWKDNQTMSFVKIGYY 512

  Fly   525 ---SSGYQYKVIGKWFNGLQLNSETVVWN-KETEQPTSACSLPCEVGMIKK-QQGD-TCCWICDS 583
               :|||::|:          ::.:::|| ..|..|.|.||..|..|..|. :||: .||:.|.:
 Frog   513 KDLTSGYEFKI----------DNSSILWNTPNTMPPRSVCSESCIPGTRKGIRQGEPVCCFDCIA 567

  Fly   584 CESFEYV--YDEFTCKDCGPGLWPYADKLSCYALDIQYMKWNSLFALIPMAIAIFGIALTSIVIV 646
            |...|..  .|...|..|....|..:.:..|...:::::..:....:..:.:::||.:|.....|
 Frog   568 CADGEITNETDARECISCPSDFWSNSHRNECVLKEVEFLATDEALGITLIFLSVFGASLVIAFTV 632

  Fly   647 LFAKNHDTPLVRASGRELSYTLLFGILVCYCNTFALIAKPTIGSCVLQRFGIGVGFSIIYSALLT 711
            ::....:|.||:|:.|.||:.:...::..:..:...:.||...||:.::..:.:|||:..|::|.
 Frog   633 VYIMYRETALVKANSRSLSFLIQVSLVFTFMTSVLFVGKPEQWSCMARQITLALGFSLCLSSILG 697

  Fly   712 KTNRISRIFHSA-SKSAQR----LKYISPQSQVVITTSLIAIQVLITMIWMVVEPPGTRFYYPDR 771
            ||..:.....|| ||.|:|    ||   |..|:::....:.||..|...::::.||   :.|.:.
 Frog   698 KTIVLMLRKKSAKSKLAERGHDALK---PVYQIIVAVIGLTIQAGICTAYLLIYPP---WVYKNM 756

  Fly   772 R----EVILKCKIQDMSFLFSQL-YNMILITICTIYAIKTRKIPENFNESKFIGFTMYTTCIIWL 831
            .    ::||:|....:.||.|.. :::.|..:..|.|...||:|:||||:|||.|.|....|:|:
 Frog   757 ESQNVKIILECNEGSIEFLCSMFGFDVFLAILSFITAFIARKLPDNFNEAKFITFGMLVFFIVWI 821

  Fly   832 AFVPIYFGTGNSYEVQTTTLCISISLSASVALV-CLYSPKVYILVFHPDKNVRKLTMNSTVYRRS 895
            :|||.|..|...::|......|   |::|..|: |::.||.||::..|::|..::          
 Frog   822 SFVPAYLSTRGKFKVAVEIFAI---LASSFGLLGCIFVPKSYIILLKPERNTEEI---------- 873

  Fly   896 AAAVAQGAPTSSGYSRTHAPGTSALTGGAVGTNASSSTLPT 936
               |...|.|:.    ..||.|||    ::.:..:|:|:.|
 Frog   874 ---VGGRAATND----KSAPATSA----SITSEINSTTVST 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mGluRNP_001259076.1 Periplasmic_Binding_Protein_Type_1 43..542 CDD:299141 144/539 (27%)
ANF_receptor 72..518 CDD:279440 125/463 (27%)
NCD3G 557..604 CDD:284890 16/50 (32%)
7tm_3 638..873 CDD:278433 72/245 (29%)
vn2r1pXP_012818896.1 PBP1_CaSR 47..530 CDD:380587 144/544 (26%)
NCD3G 538..591 CDD:369426 17/52 (33%)
7tmC_V2R-like 611..866 CDD:320407 76/263 (29%)
TM helix 1 611..636 CDD:320407 4/24 (17%)
TM helix 2 648..669 CDD:320407 3/20 (15%)
TM helix 3 678..702 CDD:320407 7/23 (30%)
TM helix 4 728..744 CDD:320407 3/15 (20%)
TM helix 5 771..797 CDD:320407 6/25 (24%)
TM helix 6 805..828 CDD:320407 11/22 (50%)
TM helix 7 833..858 CDD:320407 6/27 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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