DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 4E-T and cup

DIOPT Version :9

Sequence 1:NP_726618.3 Gene:4E-T / 43836 FlyBaseID:FBgn0052016 Length:1010 Species:Drosophila melanogaster
Sequence 2:NP_001285687.1 Gene:cup / 33934 FlyBaseID:FBgn0000392 Length:1117 Species:Drosophila melanogaster


Alignment Length:933 Identity:207/933 - (22%)
Similarity:333/933 - (35%) Gaps:258/933 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 NIIDHRSISSSHLMPAFAK----------RRFVI------------SKGSNSEESNEGINTCASK 170
            |.:.||| ..|.:||..|.          ||..|            |..:|...:|...|.|   
  Fly   341 NALMHRS-KESFVMPRIATCDDIELEGRLRRMNIWRTSDGTRFRTRSTTANLNMNNNNNNEC--- 401

  Fly   171 GKAASSPSRKGSELDTAETCLNFVQPDHDQCMSSSPTFSTSRQERRIGSGRLLPRSDNWDY---- 231
             ..|...::....|.:.|:.:. .||...|.....|...   .:||||||||  ....|.|    
  Fly   402 -MPAFFKNKNKPNLISDESIIQ-SQPPQPQTEFQDPAIV---NQRRIGSGRL--NHSKWGYNDED 459

  Fly   232 -------KNEKTVEASIENEKETS-----PNGSGSTSSLNQHNQSQHRSRT-FSGRLVERVPEVT 283
                   |::...|.:.:|.|..:     .||..|       :|.|.|..| ..|..:.|  ...
  Fly   460 YHSYHNGKSQHMEEVNSKNSKNMTVLQFFDNGEIS-------SQPQRRPNTPVMGMSINR--SEN 515

  Fly   284 DRRFQYDSKKSFDRQGIN--NRRISG----KEPFSTQSRSKRGNSYL-IHEEPEWFSAGPKSQLE 341
            |.....:|.:...|...|  .|.:||    .:|.|.....:....|. .:|||||||.||.|:|:
  Fly   516 DTLHSNESSEDLSRANENYVKRVMSGFLVVSKPKSRDVEDRHHRRYRNQNEEPEWFSCGPTSRLD 580

  Fly   342 TIDLHGFEDLEKNEERSVTE-DKNNQIQQLDKNLDAQ---------------ASK--DEASMRNS 388
            ||:|.||::   :||:.:.| :||:.:.:.::....|               .||  .:....|:
  Fly   581 TIELCGFDE---DEEKMLKEGNKNHGLGETERETSKQKMDHKYKWTHAEPMGRSKYMPKHDTNNN 642

  Fly   389 NDSLNFREVIPSDEKKHTDE------------NVVTSIQNSTDLGHPNKNKPIQMQP---SQNPE 438
            ::..|...|:.::.::..:|            ....|.||.....:.|..:|.|.||   .|...
  Fly   643 HNVENMNNVMATEHQQQKEEKRPGSGRSFQFDKFNQSQQNYESSSYVNHQQPPQTQPQQMQQQSN 707

  Fly   439 SEFNFDAFLNMHPLDNSVLSNDETGKSDSKGTSRFSRWFRQKEAANNNEFPGFRESHAQEKRGIP 503
            :..|...|:       |..:|:  |.|.|...:.|.:....:...||.|.|.......|    :|
  Fly   708 TNTNNSKFM-------SFFANE--GNSSSSSLNEFFKQAINQGHGNNPEQPKSLGHIGQ----MP 759

  Fly   504 SVKDLEAQMIKVDMRTDLINPIAGSLCQTVQMEKPIARDTEAFKKLLQQLGSQARQHHPCNDDCR 568
            ||..|||:     .|.:.:|.:.    :|..      :.|:.|:||:..|.|...|       .:
  Fly   760 SVDQLEAK-----WRRNSLNNVG----ETAN------KQTDNFQKLIGSLSSAKPQ-------SQ 802

  Fly   569 TINLSNIANHVHLESKLHQKINDGHL---QQPELSVNVPTMPTSSHVFLQKRLEIQHLIQRLHCG 630
            .:....|:|.:..:.:..|:....||   ||.:.:..:.::...:   :..|.:.|.|:.||..|
  Fly   803 AVGYDAISNFIMQQQQYQQQQQKQHLIIQQQQQHTAFLASLQLKA---ILGRADTQLLLLRLTKG 864

  Fly   631 DVSHDFLEKELDNPSTPAATKDVIATVLNEYSHSKRNPVVTGDPNIFTQQSFLQPQSVHQHYSQE 695
            ::|...|..:|.||......::.|..||                      .|...|...|.:.|:
  Fly   865 EISKHGLLVQLANPRLTDMDREAITAVL----------------------QFTNTQQQQQQHKQQ 907

  Fly   696 LHSQNTANHTI--NQLISHGNSPTPLAFTPTSVLRKMTADKDTQSPSTYCQNPQYHV-HQQNAKQ 757
            |   :..:.|:  :||.:..|         .:::::..|.:  |.|.   .|||... ||.:.:.
  Fly   908 L---DMLSSTVIASQLQNLHN---------LAIVQQTLAAR--QQPQ---HNPQTQAPHQLSQED 955

  Fly   758 VGTRENVLEPQLTATMAVQ---PRMILGGGNFAIGQNNQHLSPNMSQSRNQQVLKWTSGNMQ-MV 818
            :....||:.........::   .::|.||.        :|.:.....:|.||.......|.. ::
  Fly   956 LQAHANVIMRNAVMKRKIEEQTSKLINGGA--------KHQAQQQYLNRGQQRQARPDANSNALL 1012

  Fly   819 HGKTFGRPILKGGLNSMPHSNSALPFTAHKIEMQPIHQPHLQQQQHRF---KAVQSVESNLNTES 880
            |.      ::.||.|:  |: |..|...         ||.......||   :..||.|||     
  Fly  1013 HA------LISGGGNN--HA-SGYPMNG---------QPQKHHSNLRFGDNQNFQSFESN----- 1054

  Fly   881 VHQNITSP---VGWHQLYMQHQQQHHHTR-QQLSQRVIYGEMHRQSNPQMSPPVPGFSDSSDSGN 941
                  .|   ..:.|.|.|.||||.|.: |||:      .:|:                :::|.
  Fly  1055 ------QPHFATQYKQQYQQSQQQHPHQQPQQLN------SLHQ----------------NNAGA 1091

  Fly   942 VIKANSLTSPSYQRDERISSPTN 964
            |   ||......|....||...|
  Fly  1092 V---NSFNKAQMQAQSAISMLPN 1111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
4E-TNP_726618.3 EIF4E-T 10..736 CDD:371079 153/691 (22%)
cupNP_001285687.1 DUF2477 227..>305 CDD:287586
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466611
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006297
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12269
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.030

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