DRSC/TRiP Functional Genomics Resources

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Protein Alignment fuss and skia

DIOPT Version :10

Sequence 1:NP_001162829.1 Gene:fuss / 43835 FlyBaseID:FBgn0039932 Length:770 Species:Drosophila melanogaster
Sequence 2:NP_571010.3 Gene:skia / 30101 ZFINID:ZDB-GENE-990715-9 Length:727 Species:Danio rerio


Alignment Length:484 Identity:120/484 - (24%)
Similarity:195/484 - (40%) Gaps:95/484 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SQRSNHVSSVLLYGVQIVSLHIEGQERLCLAQISNTLLKQFSYNEIHNRRVALGITCVQCTPVQL 90
            |.||......:|.|..|....:.|::||||.||.||:|:.||..:|::....|.|.|.:||..||
Zfish    77 SDRSTERCETVLEGETISCFVVGGEKRLCLPQILNTVLRDFSLQQINSVCDDLHIYCSRCTADQL 141

  Fly    91 EILRRAGAMPVSSRRCGMITRREAERLCKSFL-GDNTPPRLPDDF-----------AFNVQHKCA 143
            |||:..|.:|.::..||:||:.:|||||.:.: |...||....:.           :|.:.|:|.
Zfish   142 EILKVMGILPFAAPSCGLITKTDAERLCNALIYGGTYPPHSKKELYGSIELELTEKSFKIYHECF 206

  Fly   144 WGCRGSFLPSRYNSSRAKCIKCSYCGMFFSPNKFIFHSHRITTNDR-YVQPDAANFNSWRRHMSL 207
            ..|:|..:|..|.|..|.||:|..|.:.:..:||:.|||:...|.. :...|:||   ||.::.|
Zfish   207 GKCKGLLVPELYTSPNAPCIQCMDCRLMYPTHKFVVHSHKSLENRTCHWGFDSAN---WRAYVLL 268

  Fly   208 S----GNDYDEKIIHAWEDVKAMFNGGTRKRLVGSSIN-------PRSPGSPTQSTA-------- 253
            |    |.:...::....:|:|..|:...:.:...|..:       |:....|.||.:        
Zfish   269 SPDYTGKEEKARLEQLLDDIKEKFDFSNKYKRKASQASDPIPAKKPKHDDFPAQSPSGDKDKQPD 333

  Fly   254 -VSSGVGSSSCG--------SPTSFE--RDTNEVDGKSGSSLPQRSQIDSQYNYGTVAAAAAV-V 306
             :.|...|::.|        .|::|.  .....|..|.|:..|.....:|.|||.::.:|.|. |
Zfish   334 WLRSLSASANKGLNCIQPRQRPSAFRPWSPNISVSDKDGAGRPASMLRESFYNYKSLESAVAPNV 398

  Fly   307 GVTAV---AAATVGVPFNLHGSTVLSPLHSLRNERDLSIMPISRNFVVDYMWQQKDQHYQQPYAR 368
            .:|..   ..|:...|.:.|.....|...|...:|.|                            
Zfish   399 ALTPPQKGGQASPSAPSSSHPHGAESEGASRGRKRRL---------------------------- 435

  Fly   369 KIPSGDNSDSSLDFDSWVKPDSNNPIPNANSVRTSDNCSFNIKNESHSSIYGIIKNHKLSGVPNS 433
               :||...|.   .......::.|:|.:.....||   ..::.||...:...:.:......|:|
Zfish   436 ---TGDTQPSP---QPCAAATASKPLPASPEEHESD---VEVEVESREELTSSLSSLSSPSFPSS 491

  Fly   434 GLNLSDYNIPSILNCSAFKPVVASTAIVS 462
            . :..|.:.||       .||....|:|:
Zfish   492 S-SAKDLSSPS-------GPVATLPAVVT 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fussNP_001162829.1 DHD_Skor 32..122 CDD:410783 37/89 (42%)
c-SKI_SMAD_bind 135..228 CDD:198114 29/97 (30%)
skiaNP_571010.3 DHD_Ski 74..175 CDD:410786 40/97 (41%)
c-SKI_SMAD_bind 198..292 CDD:462602 29/96 (30%)
YhaN 537..>712 CDD:443752
Blue background indicates that the domain is not in the aligned region.

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