DRSC/TRiP Functional Genomics Resources

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Protein Alignment fuss and skil

DIOPT Version :10

Sequence 1:NP_001162829.1 Gene:fuss / 43835 FlyBaseID:FBgn0039932 Length:770 Species:Drosophila melanogaster
Sequence 2:XP_002931592.1 Gene:skil / 100492636 XenbaseID:XB-GENE-486095 Length:643 Species:Xenopus tropicalis


Alignment Length:255 Identity:78/255 - (30%)
Similarity:118/255 - (46%) Gaps:38/255 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SQRSNHVSSVLLYGVQIVSLHIEGQERLCLAQISNTLLKQFSYNEIHNRRVALGITCVQCTPVQL 90
            |..|..::...|.|..|....:.|::||||.|:.|::|:.||..:|:.....:.|.|.:||..||
 Frog   120 SDSSTELTQTELEGESISCFMVGGEKRLCLPQVLNSVLRDFSLQQINIVCDEMYIYCSRCTSDQL 184

  Fly    91 EILRRAGAMPVSSRRCGMITRREAERLCKSFLGDNTPPR----LP----------DDFAFNVQHK 141
            .||:..|.:|.::..||:||..:|:|||.:.|...|.|:    ||          ...||.|:|.
 Frog   185 HILKVLGILPFNAPSCGLITLTDAQRLCNALLRPQTFPQNGSLLPAKNSLAQLKETGSAFEVEHD 249

  Fly   142 CAWGCRGSFLPSRYNSSRAKCIKCSYCGMFFSPNKFIFHSHRITTNDRYVQPDAA----NFNS-- 200
            |...|:|.|.|..::...|.||:|..|...||...|:.||||        .||..    .|:|  
 Frog   250 CLGKCQGLFAPHLFSQPDAPCIQCLECYGMFSTQTFVMHSHR--------SPDKRTCHWGFDSAK 306

  Fly   201 WRRHMSLSGNDYD----EKIIHAWEDVKAMFNGGTRKRLVGSSINPRSPGSPTQSTAVSS 256
            |..::.||....|    :|:....:::|..||    |:.....|.|:  |...|:..:.|
 Frog   307 WHCYVHLSPKYLDTPEGKKMNALLKEMKEKFN----KKNQPKRIQPK--GEHIQTLELPS 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fussNP_001162829.1 DHD_Skor 32..122 CDD:410783 32/89 (36%)
c-SKI_SMAD_bind 135..228 CDD:198114 31/102 (30%)
skilXP_002931592.1 DHD_Sno 119..218 CDD:410787 35/97 (36%)
c-SKI_SMAD_bind 243..338 CDD:198114 31/102 (30%)
SMC_prok_B <417..633 CDD:274008
Blue background indicates that the domain is not in the aligned region.

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