DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and HDG1

DIOPT Version :10

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_191674.1 Gene:HDG1 / 825287 AraportID:AT3G61150 Length:808 Species:Arabidopsis thaliana


Alignment Length:279 Identity:66/279 - (23%)
Similarity:112/279 - (40%) Gaps:62/279 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 NTTTAHLTLPPAASVVTSPANLS------GQADRDDVQKRELQFSVEVSHTNSHDSTSDGNSEHN 248
            :|......:.|:.|:..|.:.||      |:..|:. :..|...|.:.|.....:|.|:.::...
plant    32 DTMLGSAAIAPSQSLPFSSSGLSLGLQTNGEMSRNG-EIMESNVSRKSSRGEDVESRSESDNAEA 95

  Fly   249 SSGD--EDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 311
            .|||  :.|...|:.|::..|:    :.:||..||..|:...:||...|..|:.::.|...:::.
plant    96 VSGDDLDTSDRPLKKKKRYHRH----TPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKF 156

  Fly   312 WFSNRRAKWRREEKMRTQ---------RRSADTVDGSGRTSTANNPSGTTASSSVATSNNSTPGI 367
            ||.|||.      :|:||         |:..|.:       .|.|.|...|..:....|...|.:
plant   157 WFQNRRT------QMKTQIERHENALLRQENDKL-------RAENMSVREAMRNPMCGNCGGPAV 208

  Fly   368 VNSAINVAE---RTSSALVSNSLPEA----------SNG-------PTVLG-----GEANTTHTS 407
            :.. |::.|   |..::.:.:.|...          |||       ..|||     |..|.....
plant   209 IGE-ISMEEQHLRIENSRLKDELDRVCALTGKFLGRSNGSHHIPDSALVLGVGVGSGGCNVGGGF 272

  Fly   408 SESPPLQP-AAPRLPLNSG 425
            :.|.||.| |:||..:::|
plant   273 TLSSPLLPQASPRFEISNG 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645
COG5576 <253..368 CDD:227863 30/123 (24%)
Homeodomain 267..322 CDD:459649 16/54 (30%)
HDG1NP_191674.1 COG5576 69..185 CDD:227863 32/132 (24%)
Homeodomain 111..166 CDD:459649 17/64 (27%)
START_ArGLABRA2_like 314..537 CDD:176884
Blue background indicates that the domain is not in the aligned region.

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