DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and PAX8

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_003457.1 Gene:PAX8 / 7849 HGNCID:8622 Length:450 Species:Homo sapiens


Alignment Length:529 Identity:177/529 - (33%)
Similarity:245/529 - (46%) Gaps:134/529 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PHSSVGQSTLFGCSTAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGC 77
            ||:|:         .:||.|:|||||.:|||||||:..||:||:|||.|.|||||||.|:||:||
Human     2 PHNSI---------RSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGC 57

  Fly    78 VSKILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNI 142
            ||||||||||||||:|..||||||:|||..||:||.||||:.|::||||||||||:|.||::|.:
Human    58 VSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTV 122

  Fly   143 PSVSSINRVLRNLASQKEQQAQQQNESVYEKLRMFNGQTGGWAWYPSNTTTAHLTLPPA-----A 202
            ||||||||::|.    |.||.             ||        .|.::..|..:|.|.     :
Human   123 PSVSSINRIIRT----KVQQP-------------FN--------LPMDSCVATKSLSPGHTLIPS 162

  Fly   203 SVVTSPANLSGQAD---------------RDDVQKRELQFSVEVSHTNSHDSTSDGNSEHNSSGD 252
            |.||.|.  |.|:|               :....||::..|.:.|...|.||.|      :||| 
Human   163 SAVTPPE--SPQSDSLGSTYSINGLLGIAQPGSDKRKMDDSDQDSCRLSIDSQS------SSSG- 218

  Fly   253 EDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRR 317
                     .||..|. .:||...::.||..|||.|||:.:|..                     
Human   219 ---------PRKHLRT-DAFSQHHLEPLECPFERQHYPEAYASP--------------------- 252

  Fly   318 AKWRREEKMRTQRRSADTV-DGSGRTSTANNPSGTTASS-----------SVATSNNSTPGIVNS 370
            :..:.|:.:........|: ||....:.:|.|.|...|:           |.......||.:.:|
Human   253 SHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPLGRNLSTHQTYPVVADPHSPFAIKQETPEVSSS 317

  Fly   371 AINVAERTSSALVS-----------NSLPEASNGPTVLGGEANTTHTSSESPPLQPAAPRLPLNS 424
            :...:..:|||.:.           |:.|.|::......|:|..:......|.|....|.:|.:.
Human   318 SSTPSSLSSSAFLDLQQVGSGVPPFNAFPHAASVYGQFTGQALLSGREMVGPTLPGYPPHIPTSG 382

  Fly   425 GFNTMYSSIPQPIATMAENYNSSLGSMTPSCLQQRDAYPYMFHDPLS--LGSPYVSAHHRNTACN 487
            ..:...|:|...:|  ...|:.:....||     ..:|...:..|.|  |.|||    :.::...
Human   383 QGSYASSAIAGMVA--GSEYSGNAYGHTP-----YSSYSEAWRFPNSSLLSSPY----YYSSTSR 436

  Fly   488 PSAAHQQPP 496
            |||    ||
Human   437 PSA----PP 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 90/123 (73%)
COG5576 <253..368 CDD:227863 25/126 (20%)
Homeobox 269..322 CDD:395001 11/52 (21%)
PAX8NP_003457.1 PAX 9..133 CDD:128645 90/123 (73%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 12..68 42/55 (76%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 87..135 32/51 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..222 19/80 (24%)
Pax2_C 337..448 CDD:315141 27/120 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.