DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and pax6b

DIOPT Version :10

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_005168876.1 Gene:pax6b / 60639 ZFINID:ZDB-GENE-001031-1 Length:450 Species:Danio rerio


Alignment Length:557 Identity:270/557 - (48%)
Similarity:322/557 - (57%) Gaps:136/557 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 HGHPHSSVGQSTLFGCSTAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQ-- 72
            |..|....|.:::...|   |||:||||||:||||||||||||||||||||||||||||||||  
Zfish     7 HNQPTWESGVASMMQNS---HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTH 68

  Fly    73 -----------VSNGCVSKILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWE 126
                       |||||||||||||||||||:|||||||||||||..||.|||.||||||||||||
Zfish    69 DDAKVQLDNKNVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWE 133

  Fly   127 IRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQNESVYEKLRMFNGQTGGW----AWY 187
            ||||||||.||.:||||||||||||||||||:|:|...   :.:|:||||.|||:|.|    .||
Zfish   134 IRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA---DGMYDKLRMLNGQSGTWGTRPGWY 195

  Fly   188 PSNTTTAHLTLPPAASVVTSPANLSGQADRDDVQKRELQFSVEVSHTNSHDSTSDGNSEHNSSGD 252
            |.                   .::.||.::|..|:::          |..::|:..:|  |....
Zfish   196 PG-------------------TSVPGQPNQDGCQQQD----------NGGENTNSISS--NGEDS 229

  Fly   253 EDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRR 317
            :::||||:||||||||||||:.|||::||||||||||||||||||||.||.||||||||||||||
Zfish   230 DETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRR 294

  Fly   318 AKWRREEKMRTQRRSADTVDGSGRTSTANNPSGTTASSSV--ATSNNSTPGIVNSAINVAERTSS 380
            ||||||||:|.|||.|.       .|:::.|..::.::||  |....:||        |:..|.|
Zfish   295 AKWRREEKLRNQRRQAS-------NSSSHIPISSSFNTSVYQAIPQPTTP--------VSFTTGS 344

  Fly   381 ALVSNSLPEASNGPTVLGGEANTTHTSSESPPLQPAAPRLPLNSGFNTMYSSIPQPIATMAENYN 445
            .|                |..:|..|                    ||.....|.|..|||.|. 
Zfish   345 ML----------------GRPDTALT--------------------NTYTGLPPMPSFTMANNL- 372

  Fly   446 SSLGSMTPSCLQQRDAYPYMFHDPLSLGSPYVSAHHRNTACNPSAAHQQPPQHGVYTNSSPMPSS 510
                .|.||   |..:|..|..     .||.|:....:|        ..||....:.||..|.:|
Zfish   373 ----PMQPS---QTSSYSCMLP-----SSPSVNGRSFDT--------YTPPHMQAHMNSQTMATS 417

  Fly   511 ---NTGVISAGVSVPVQI-STQNVSDLTGSNYWPRLQ 543
               :||:||.|||||||: .|:  .|:  |.||.|||
Zfish   418 GTASTGLISPGVSVPVQVPGTE--PDM--SQYWSRLQ 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 112/136 (82%)
COG5576 <253..368 CDD:227863 75/116 (65%)
Homeodomain 267..322 CDD:459649 48/54 (89%)
pax6bXP_005168876.1 PAX 23..160 CDD:128645 113/139 (81%)
Homeodomain 244..299 CDD:459649 48/54 (89%)

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