DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and pax2b

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_571715.1 Gene:pax2b / 60638 ZFINID:ZDB-GENE-001030-4 Length:386 Species:Danio rerio


Alignment Length:466 Identity:171/466 - (36%)
Similarity:226/466 - (48%) Gaps:105/466 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIKPR 94
            |.|:||||||:||||||||..||:||||||.|.|||||||.|:||:||||||||||||||||||.
Zfish    16 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPG 80

  Fly    95 AIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQK 159
            .||||||:|||..||.|||||||:.|::||||||||||:|.:|::|.:||||||||::|.    |
Zfish    81 VIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRT----K 141

  Fly   160 EQQAQQQNESVYEKLRMFNGQTGGWAWYPSNTTTAHLTLPPAAS-VVTSPANLSGQADRDDVQKR 223
            .||.             |:....|    .|.:|..|..:|..|| .|:|.:|       |.|...
Zfish   142 VQQP-------------FHPSPDG----TSLSTPGHTIIPSTASPPVSSSSN-------DPVGSY 182

  Fly   224 ELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTH 288
            .:...:.:..:|......|.:....|:...|||..:...||..| ..:|:.:|:::|::.|||..
Zfish   183 SINGILGIPRSNGEKRKRDADGSEGSAQSSDSQGSVESLRKHLR-ADAFTQQQLEALDRVFERPA 246

  Fly   289 YPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQRRSADTVDGSGRTSTANNPSGTTA 353
            :||||.                           ..|.::.::.|..::           |:..|.
Zfish   247 FPDVFP---------------------------TSEHIKPEQASEYSL-----------PALNTG 273

  Fly   354 SSSVATSNNSTPGIVNSAINVAERTSSALVSNSLPEASNGPTVLGGE-ANTTHTSSESPPLQPAA 417
            ...|..|.:|:          |.....|.||.|.|        :|.: ||||     .|...|..
Zfish   274 LDEVKPSLSSS----------AASDLGASVSQSYP--------VGRDMANTT-----LPGYPPHV 315

  Fly   418 PRLPLNSGFNTMYSSIPQPIATMAENYNSSLGSMTPSCLQQRDAY--PYMFHDPLSLGSPYVSAH 480
            |  |...|        ..|.:|:|.....|..|..|....|...|  .:.|.:|..|.|||..:.
Zfish   316 P--PTGQG--------SYPTSTLAGMVPGSEFSGNPYSHPQYTTYNEAWRFSNPAILSSPYYYSA 370

  Fly   481 HRNTACNPSAA 491
            .|.:| .|:||
Zfish   371 SRGSA-PPTAA 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 93/122 (76%)
COG5576 <253..368 CDD:227863 23/114 (20%)
Homeobox 269..322 CDD:395001 10/52 (19%)
pax2bNP_571715.1 PAX 15..139 CDD:128645 93/122 (76%)
Pax2_C 290..384 CDD:289189 34/115 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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