DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and pax8

DIOPT Version :10

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_073807835.1 Gene:pax8 / 60637 ZFINID:ZDB-GENE-001030-3 Length:448 Species:Danio rerio


Alignment Length:576 Identity:178/576 - (30%)
Similarity:243/576 - (42%) Gaps:192/576 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIKP 93
            ||.|:|||||::|||||||:..||:||::||.|.|||||||.|:||:||||||||||||||||||
Zfish     8 GHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKP 72

  Fly    94 RAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQ 158
            ..||||||:|||..||:|||:|||:.|::||||||||||:|.||:.|.:||||||||::|.    
Zfish    73 GVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDGDTVPSVSSINRIIRT---- 133

  Fly   159 KEQQAQQQNESVYEKLRMFNGQTGGWAWYPSNT---TTAHLTLPPAASVVTSPANLSGQADRDDV 220
            |.||.             ||        .|.:|   :..|..:|  :|.||.|.  |.|:|    
Zfish   134 KVQQP-------------FN--------LPLDTKGLSPGHTLIP--SSAVTPPE--SPQSD---- 169

  Fly   221 QKRELQFSVEVSHTNS-------HDSTSDGNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQID 278
                     .:..|.|       ..:|:||...|:.|..|..:                  ..:|
Zfish   170 ---------SLGSTYSINGLLGITQTTADGKRGHDDSDQESCR------------------HSVD 207

  Fly   279 S------LEKEFERTHYPDV-----FARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQRRS 332
            |      ..|:....|:|..     |.|...:|.....:|..|::            .:......
Zfish   208 SQGSGGGARKQLRTEHFPSAALDCGFERHYSSDSFSQSKAEQQLY------------PLALMNPG 260

  Fly   333 ADTVDGSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALVSNSLPEASNGPTVL 397
            .|  :|.|.:|.:.|.:.....:.|..:....|..:...::..        .|||   |..|.::
Zfish   261 LD--EGKGASSISRNLAAHQGYAVVTEALQPLPLCLKQEVSPE--------GNSL---SPSPNII 312

  Fly   398 GGEANTTHTSSESPPLQPAAPRLPLNSGFNTMYSSIPQPIATMAENYNSSLGSMTPSCLQQRDAY 462
            .|.|....::..||...|.|                            ||.||            
Zfish   313 SGSAFLDLSTISSPSSAPVA----------------------------SSCGS------------ 337

  Fly   463 PYMFHDPLSLGSPYVSAHHRNTACNPSAAHQQPPQHGVYTNSSPM-----------------PSS 510
            .::.|...|.      :||             .|.||.:::.|.|                 |::
Zfish   338 AHLSHGFSSF------SHH-------------APVHGQFSSPSLMAGREVASSMLPGYPPHIPTA 383

  Fly   511 NTG----VISAGVSVPVQISTQNVSDLTGSNY---WPRLQXSSIFGSPLDHLSKAT 559
            .||    .|:..||.| :.:.|:.|....|:|   | |.. |||.|||. :.|.||
Zfish   384 QTGFSSSTIAGMVSAP-EYTGQSYSHPAYSSYSEAW-RFTNSSILGSPY-YYSSAT 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 90/123 (73%)
COG5576 <253..368 CDD:227863 18/125 (14%)
Homeodomain 267..322 CDD:459649 10/65 (15%)
pax8XP_073807835.1 None

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