DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and hoxa3a

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_571609.1 Gene:hoxa3a / 58049 ZFINID:ZDB-GENE-000823-3 Length:411 Species:Danio rerio


Alignment Length:465 Identity:93/465 - (20%)
Similarity:144/465 - (30%) Gaps:166/465 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 TTTAHLTLPPAA-SVVTSPANLSGQADRDDVQKRELQFS------------VEVSHTNSHDSTSD 242
            |.|:....||.| |..:||::|:...:.|...|..:..|            ::.|..|:...:..
Zfish    80 TDTSDNKQPPTAPSGPSSPSSLNQIPNIDSAAKNPVHVSPTPSTRKHIFPWMKESRQNTKQKSCS 144

  Fly   243 GNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEA 307
            ..|..:.:|.:.|.......:   |.||::::.|:..|||||....|.....|..:|:.:.|.|.
Zfish   145 IISVESCAGRQKSPPGSAASK---RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTER 206

  Fly   308 RIQVWFSNRRAKWRREEKMRTQRRSADTVDGSGRTSTANNPSGTTASSSVATSNNSTPG------ 366
            :|::||.|||.|:::::|            |.|...   :|...:..|.|:.|:....|      
Zfish   207 QIKIWFQNRRMKYKKDQK------------GLGMMP---SPGAQSPHSPVSLSSGGGGGGGSAYL 256

  Fly   367 -IVNSAINVAERTSSALVSNSLPEASNGPTVLGGEANTTHTSSESPPLQPAAPRLPLNSGFNTMY 430
             .::|.:|      |....:..|...|.|     ::||....:..|||....|            
Zfish   257 SSMHSLVN------SVTYDSPSPHLYNKP-----QSNTYSLPTSYPPLNNCPP------------ 298

  Fly   431 SSIPQPIATMAENYNSSLGSMTPSCLQQRDAYPYMFHDPLSLGSPYVSAHHRNTACNPSAAHQQP 495
               ||      :.|..: |:.||.                      ...||          .|..
Zfish   299 ---PQ------KRYQGT-GTATPE----------------------YDTHH----------IQGN 321

  Fly   496 PQHGVYTNSSPMPSSNTGVISAGVSVPVQISTQNVSDLTGSNYWPRLQXSSIFGSPLDHLSKATA 560
            ..:|.....||:..|..|..|              ..|.|       ..:|:||  |.||...:.
Zfish   322 NNYGTQVQGSPVYVSGGGGYS--------------DSLVG-------MGASVFG--LTHLPHPSQ 363

  Fly   561 AAIIAAQAAEKSHKHRKEHSIVSIHTTKRKKNPPSLKRQTTCCSSRYLNMTFGAGKDVDVVIGQG 625
            ..|....|....:.|                       |...|.|.....|              
Zfish   364 GNIDYNGAITMGNSH-----------------------QQGACDSNPCTFT-------------- 391

  Fly   626 LIVSLTPHIS 635
               .||||.|
Zfish   392 ---DLTPHYS 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645
COG5576 <253..368 CDD:227863 30/121 (25%)
Homeobox 269..322 CDD:395001 20/52 (38%)
hoxa3aNP_571609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..126 12/45 (27%)
Antp-type hexapeptide 127..132 0/4 (0%)
Homeobox 168..220 CDD:278475 20/51 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 223..250 7/41 (17%)
DUF4074 347..409 CDD:290032 19/101 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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