DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and PAX4

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001353039.1 Gene:PAX4 / 5078 HGNCID:8618 Length:351 Species:Homo sapiens


Alignment Length:443 Identity:162/443 - (36%)
Similarity:218/443 - (49%) Gaps:119/443 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIKP 93
            |.|.:|||||::|||||||..|||:||.||.||.|||||||||:||||||||||||||.||.::|
Human     5 GISSMNQLGGLFVNGRPLPLDTRQQIVRLAVSGMRPCDISRILKVSNGCVSKILGRYYRTGVLEP 69

  Fly    94 RAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQ 158
            :.|||||||:||.|||.:||..|.|||::|||||:.:|.:|.:|..|..|||||||||||     
Human    70 KGIGGSKPRLATPPVVARIAQLKGECPALFAWEIQRQLCAEGLCTQDKTPSVSSINRVLR----- 129

  Fly   159 KEQQAQQQNESVYEKLRMFNGQTGGWAWYPSNTTTAHLTLPPAASVVTSPANLSGQADRDDVQKR 223
                |.|:::.:                 |.....:...|.||   |.:|               
Human   130 ----ALQEDQGL-----------------PCTRLRSPAVLAPA---VLTP--------------- 155

  Fly   224 ELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTH 288
                         |..:......|..:|              .||||.||..|.::|||||:|..
Human   156 -------------HSGSETPRGTHPGTG--------------HRNRTIFSPSQAEALEKEFQRGQ 193

  Fly   289 YPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQRRSADTVDGSGRTSTANNPSGTTA 353
            |||..||.:||....|||..::||||||||||||:||::.:.:                   ...
Human   194 YPDSVARGKLATATSLPEDTVRVWFSNRRAKWRRQEKLKWEMQ-------------------LPG 239

  Fly   354 SSSVATSNNSTPGIVNSAINVAERTSSALVSNSLPEASN-GPTV--LGGEANTTHTSSESPP--- 412
            :|...|.....|||::     |:::..::.:.:||.... ||:.  |..........|::||   
Human   240 ASQGLTVPRVAPGIIS-----AQQSPGSVPTAALPALEPLGPSCYQLCWATAPERCLSDTPPKAC 299

  Fly   413 LQPAAPRLP-----LNSGFNTMYSSIPQP-----IATMAENYNSSLGSMTPSC 455
            |:|....||     |:||.    ..:|.|     :|::    :.|...:.|.|
Human   300 LKPCWGHLPPQPNSLDSGL----LCLPCPSSHCHLASL----SGSQALLWPGC 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 85/123 (69%)
COG5576 <253..368 CDD:227863 41/114 (36%)
Homeobox 269..322 CDD:395001 31/52 (60%)
PAX4NP_001353039.1 PAX 5..129 CDD:128645 85/123 (69%)
Homeobox 174..226 CDD:306543 30/51 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1152885at2759
OrthoFinder 1 1.000 - - FOG0002521
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
44.020

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