DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and PAX2

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_003981.3 Gene:PAX2 / 5076 HGNCID:8616 Length:432 Species:Homo sapiens


Alignment Length:500 Identity:172/500 - (34%)
Similarity:228/500 - (45%) Gaps:105/500 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FGCSTAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYE 87
            |.....||.|:||||||:||||||||..||:||||||.|.|||||||.|:||:||||||||||||
Human    10 FSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYE 74

  Fly    88 TGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVL 152
            ||||||..||||||:|||..||.|||:|||:.|::||||||||||:|.:|::|.:||||||||::
Human    75 TGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRII 139

  Fly   153 RNLASQKEQQAQQQNESVYEKLRMFNGQTGGWAWYPSNTTTAHLTLPPAASVVTSPA---NLSG- 213
            |.    |.||.......        ...||..|  |.:|.......||.:|....|.   :::| 
Human   140 RT----KVQQPFHPTPD--------GAGTGVTA--PGHTIVPSTASPPVSSASNDPVGSYSINGI 190

  Fly   214 -QADRDDVQKR---ELQFSVEVSHTN--------------SHDSTSDGNSEHNSSGDEDSQMRLR 260
             ...|.:.:||   |::...:.:|..              |..|..:|:|:   ||.:..:..||
Human   191 LGIPRSNGEKRKRDEVEVYTDPAHIRGGGGLHLVWTLRDVSEGSVPNGDSQ---SGVDSLRKHLR 252

  Fly   261 LKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVF-ARERLADKIGLPEARIQVWFSNRRAKWRREE 324
                    ..:|:.:|:::|::.|||..||||| |.|.:..:.|                  .|.
Human   253 --------ADTFTQQQLEALDRVFERPSYPDVFQASEHIKSEQG------------------NEY 291

  Fly   325 KMRTQRRSADTVDGSGRTST----ANNPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALVSN 385
            .:.......|.|..|...||    .:|.|||.....|                    |...:.|.
Human   292 SLPALTPGLDEVKSSLSASTNPELGSNVSGTQTYPVV--------------------TGRDMAST 336

  Fly   386 SLPEASNGPTVLGGEANTTHTSSESPPLQPAAPRLPLNSGFNTMYSSIPQPIATMAENYNSSLGS 450
            :||         |...:...|...|.|....|..:| .|.|:....|.||..|     ||.:...
Human   337 TLP---------GYPPHVPPTGQGSYPTSTLAGMVP-GSEFSGNPYSHPQYTA-----YNEAWRF 386

  Fly   451 MTPSCLQQRDAYPYMFHDPLSLGSPYVSAHHRNTACNPSAAHQQP 495
            ..|:.|......|.:...||.:.:......|.....:....|..|
Human   387 SNPALLMPPPGAPPLPLLPLPMTATSYRGDHIKLQADSFGLHIVP 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 93/123 (76%)
COG5576 <253..368 CDD:227863 27/119 (23%)
Homeobox 269..322 CDD:395001 14/53 (26%)
PAX2NP_003981.3 PAX 16..140 CDD:128645 93/123 (76%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 19..75 45/55 (82%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 94..142 31/51 (61%)
homeodomain 255..>278 CDD:412151 10/22 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..325 7/20 (35%)
Pax2_C 305..>390 CDD:403565 26/119 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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