DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and sv

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster


Alignment Length:712 Identity:207/712 - (29%)
Similarity:306/712 - (42%) Gaps:200/712 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 HSSVGQSTLFGCSTAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCV 78
            |||.|     ..|..||.|:||||||:||||||||..||:||||||:|.|||||||.|:||:|||
  Fly   165 HSSQG-----SISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCV 224

  Fly    79 SKILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIP 143
            ||||.|||||||.|...||||||:|||.|||..||:||||.|::||||||||||:|.:|:.||:|
  Fly   225 SKILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 289

  Fly   144 SVSSINRVLRNLASQKEQQA-QQQNESVYEKL-------RMFNGQTG--GWAWYPSNTTTA---- 194
            |||||||::||.|::|.:.. ..|...|.:.|       ...:..||  |....|::.::|    
  Fly   290 SVSSINRIVRNKAAEKAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSVN 354

  Fly   195 ---------HLTLPPAA--SVVTSPANLSGQAD-----RDDVQKRELQFSVE----VSHTNSHDS 239
                     |.::|.:.  ||..|..:::..::     ....::|...:|:.    :.|.:...:
  Fly   355 TNVSASASVHASIPTSGTDSVQVSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSHN 419

  Fly   240 TSDGNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGL 304
            .::.:|.:|::..|.|..|.|::...:.:.|:..::..|.              .|:|::...| 
  Fly   420 NNNNSSVNNNNNTESSCKRKRIEAHDENHDTNIHSDNDDG--------------KRQRMSTYSG- 469

  Fly   305 PEARIQVWFSNRRAKW--RREEKMRTQ--RRSADT------------------VDGSGRTSTANN 347
            .:....:|    ..||  :.:.|:..:  ..:|.|                  :.|||.|::.|:
  Fly   470 DQLYTNIW----SGKWCIKDDHKLLAELGNLTASTGNCPATYYEASNGFSTTPISGSGATASGND 530

  Fly   348 PSGTTASSSVATSNNSTPGIVNSAINVAERTSS------------ALVSNSLPEASNGP--TVLG 398
            .|  ....|:.|.:.:...|...||..:..|.|            .|.:||:.|.:..|  |.|.
  Fly   531 TS--MLYDSITTISQTQSSIYTPAIGPSIGTGSLTPLVPISMHEMKLSANSIQEQTVPPFYTALA 593

  Fly   399 GEANTTH-------------------TSSESPPLQPAAPRL--------------PLNSGFNTMY 430
            .:.|.|.                   .||:|..|.|.:.|:              ||.:......
  Fly   594 FDGNYTSMTSLENCSSLVGQEHIVMPESSDSNTLCPISTRIVPDITETNSTRVKEPLTNSDGCSE 658

  Fly   431 SSIPQPIATMAENYNSSLGSMTPSCLQQRDAYPYMFHDPLSLGSPYVSAHHR---NTACNPSAAH 492
            .:..:|     |..|||..|       ...|.|::.|    :|...:..:.|   |.:.:||:..
  Fly   659 DNNKEP-----EKSNSSQSS-------DHIASPHLHH----IGEEQLRGNRRSNLNASTHPSSLI 707

  Fly   493 QQPPQH------------------------GVYTNSSPMPSSNTGVISAGVSVPVQIS------- 526
            ...|..                        |:|:..:.:||.|.  .|||.|..|..|       
  Fly   708 PLQPSGGSSLLNINPSENRSDVELNLSNNVGLYSTPTVLPSFNH--YSAGCSSVVPGSDYAYNPA 770

  Fly   527 -TQ-----------NVSDLTGSNYWPRLQXSSIFGSPLDHLSK----ATAAAIIAAQAAEKS 572
             ||           ..|.|..|:|:   . |....|||.|..:    ||.|..:|:.|:..|
  Fly   771 YTQYGGAYGSYGYGTGSGLINSSYY---YESGQTQSPLTHDLRSPLVATRANSLASAASPGS 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 92/123 (75%)
COG5576 <253..368 CDD:227863 23/136 (17%)
Homeobox 269..322 CDD:395001 8/54 (15%)
svNP_524633.3 PAX 175..299 CDD:128645 92/123 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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