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Protein Alignment toy and LHX8
DIOPT Version :9
Sequence 1: | NP_001368990.1 |
Gene: | toy / 43833 |
FlyBaseID: | FBgn0019650 |
Length: | 655 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_016856805.1 |
Gene: | LHX8 / 431707 |
HGNCID: | 28838 |
Length: | 363 |
Species: | Homo sapiens |
Alignment Length: | 142 |
Identity: | 37/142 - (26%) |
Similarity: | 61/142 - (42%) |
Gaps: | 31/142 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 266 QRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQR 330
:|.||||:.:|:..::.:|.:.:.||....::||::.||....|||||.|.||:.::.
Human 216 KRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKH------- 273
Fly 331 RSADTVDGSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALVSNSLPEASNGPT 395
.:.|.|.:|..::|..|..|.| .:.|...||.| |:.....|
Human 274 -------------VSPNHSSSTPVTAVPPSRLSPP-------MLEEMAYSAYV----PQDGTMLT 314
Fly 396 VLGGEANTTHTS 407
.|....:.||.:
Human 315 ALHSYMDDTHAA 326
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
toy | NP_001368990.1 |
PAX |
29..153 |
CDD:128645 |
|
COG5576 |
<253..368 |
CDD:227863 |
28/101 (28%) |
Homeobox |
269..322 |
CDD:395001 |
20/52 (38%) |
LHX8 | XP_016856805.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R6207 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.940 |
|
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