DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment toy and Awh

DIOPT Version :9

Sequence 1:	NP_001368990.1	Gene:	toy / 43833	FlyBaseID:	FBgn0019650	Length:	655	Species:	Drosophila melanogaster
Sequence 2:	NP_001261379.1	Gene:	Awh / 38451	FlyBaseID:	FBgn0013751	Length:	287	Species:	Drosophila melanogaster

Alignment Length:	170	Identity:	46/170 - (27%)
Similarity:	71/170 - (41%)	Gaps:	39/170 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly   234 TNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERL 298
            |.|.|...||:..|              |.|.:|.||:|:.||:..|:..|:....||....||:
  Fly   131 TTSSDEGCDGDGYH--------------KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 181

  Fly   299 ADKIGLPEARIQVWFSNRRAKWRREEKMRTQRRSADTVDGSGRT------------STANNP--- 348
            |...||.:...||||.|.||  |:::.:...:......:||...            :.|.||
  Fly   182 ASVTGLSKRVTQVWFQNSRA--RQKKHIHAGKNKIREPEGSSFARHINLQLTYSFQNNAQNPMHL 244

  Fly   349 SGTTA-------SSSVATSNNSTPGIVNSAINVAERTSSA 381
            :|:.|       ||....|.:|:...:.|.:.: |::|.|
  Fly   245 NGSKAGLYPTHESSMDELSQDSSVHCMPSEVXL-EQSSPA 283

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
toy	NP_001368990.1	PAX	29..153	CDD:128645
		COG5576	<253..368	CDD:227863	36/136 (26%)
		Homeobox	269..322	CDD:395001	21/52 (40%)
Awh	NP_001261379.1	LIM1_AWH	8..61	CDD:188759
		LIM2_AWH	69..123	CDD:188765
		Homeobox	152..204	CDD:278475	22/53 (42%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R6207
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.940