DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and gsb-n

DIOPT Version :10

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_523862.1 Gene:gsb-n / 38004 FlyBaseID:FBgn0001147 Length:449 Species:Drosophila melanogaster


Alignment Length:591 Identity:175/591 - (29%)
Similarity:244/591 - (41%) Gaps:201/591 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIKP 93
            |...:||||||::||||||:..|.||||:|.||.|||.|||.|:||:|||||||.||.|||||:|
  Fly    20 GQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIRP 84

  Fly    94 RAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQ 158
            ..||||||:|.:..:..:|.:.::|.||||:||||::|:.|...:.   ||.|||:|:||  .|.
  Fly    85 GVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFADP---PSTSSISRLLR--GSD 144

  Fly   159 KEQQAQQQNESVYEKLRMFNGQTGGWAWYPSNTTTAHLTLPPAASVVTSPANLSGQADRDDVQKR 223
            :..:..:::.::       ||..||                                 ||.    
  Fly   145 RGSEDGRKDYTI-------NGILGG---------------------------------RDS---- 165

  Fly   224 ELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTH 288
                  ::|                   |.:|:..:.||||.:|:||:|:.||:::||:.|.||.
  Fly   166 ------DIS-------------------DTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQ 205

  Fly   289 YPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQRRSADTVDGSGRTSTANNPSGTTA 353
            ||||:.||.||....|.|||||||||||||:.|:.               ||.:::..:|..:.:
  Fly   206 YPDVYTREELAQTTALTEARIQVWFSNRRARLRKH---------------SGGSNSGLSPMNSGS 255

  Fly   354 SSSVATSNNSTPGIVNSAINVAERTSSALVSNSLPEASNGPTVLGGEANTTHTSSESPPLQPAAP 418
            |              |..:.|.       :|.:......||..:|..|.                
  Fly   256 S--------------NVGVGVG-------LSGATAPLGYGPLGVGSMAG---------------- 283

  Fly   419 RLPLNSGFNTMYSSIPQPIATMAENYNSSLGSMTPSCLQQRDAYPYMFHDPLSLGSPYVSAHHRN 483
                       ||..|...||.|               ...|...:..|.|        |:|| :
  Fly   284 -----------YSPAPGTTATGA---------------GMNDGVHHAAHAP--------SSHH-S 313

  Fly   484 TACNPSAAH-----------QQPPQHGVYTNSSPMPSSNTGVISAGVSVPVQISTQN-----VSD 532
            .|...:|||           |...|||               ...|.:.|....:||     .|.
  Fly   314 AATAAAAAHHHTQMGGYDLVQSAAQHG---------------FPGGFAQPGHFGSQNYYHQDYSK 363

  Fly   533 LTGSNYWPRLQXSSIFG-SPLDHL----SKATAA---AIIAAQAAEKSHKHRKEHSIVSIHTTKR 589
            ||..:: .:|...|:.. ||..||    ||..|.   :..|..||...:.|..:|.:........
  Fly   364 LTIDDF-SKLTADSVSKISPSLHLSDNYSKLEAPSNWSQAAYHAAANYNAHVAQHQLNDYAAAAA 427

  Fly   590 KKNPPS 595
            ..||.|
  Fly   428 HGNPAS 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 70/123 (57%)
COG5576 <253..368 CDD:227863 43/114 (38%)
Homeodomain 267..322 CDD:459649 33/54 (61%)
gsb-nNP_523862.1 HTH_CRP 20..141 CDD:481199 70/123 (57%)
Homeodomain 183..239 CDD:459649 33/55 (60%)

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