DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and PHDP

DIOPT Version :10

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster


Alignment Length:193 Identity:58/193 - (30%)
Similarity:96/193 - (49%) Gaps:16/193 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 LRNLASQKEQQAQQQNESVYEKLRMFNGQTGGWAWYPSNTTTAHLTLPPAASVVTSPANLSGQAD 216
            |.|.|:..:......|...|.     :|..||.....::....:|.:..:..:..:.:.:.|..:
  Fly     5 LLNKANFDKDCLYTANSEFYN-----SGANGGGLSVANHINHYNLMIDSSYKLCANESAIRGSLN 64

  Fly   217 RDDVQKRELQFS----VEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQI 277
                |:..|.||    |...:..:|:..|.....|..|..:|. :.|..|.|.:|.||:|::.|:
  Fly    65 ----QESSLLFSKITTVSEFYPATHNIGSYNTDFHLKSYGDDG-LSLTDKSKQRRIRTTFTSNQL 124

  Fly   278 DSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEK--MRTQRRSADTVDG 338
            :.|||.|..|||||::.||.:|.|:.|.|||:||||.|||||:|::|:  :...:..:..:||
  Fly   125 NELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQERHAIYIMKDKSSKLDG 187

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity