DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and Poxn

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001261016.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster


Alignment Length:455 Identity:134/455 - (29%)
Similarity:202/455 - (44%) Gaps:99/455 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIKP 93
            |.:|:||||||:||||||||..|::||:||..|.|||||||.|.||:|||||||.|:||||||:|
  Fly     5 GQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRFYETGSIRP 69

  Fly    94 RAIGGSKPR-VATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLAS 157
            .:|||||.: |||..||:||...|.|...:||||||::|..::||:..::||:|||||:|||...
  Fly    70 GSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSINRILRNSGL 134

  Fly   158 -QKEQQAQQQNESVYEKLRMFNGQTGGWAWYPSNTTTAHLTLPPAASVVTSPA---NLSGQADRD 218
             ..|..:.|||.:.............|..  |||........||......:||   :::..|...
  Fly   135 WTDEMTSSQQNAAAAAAAAAAAAHQAGSG--PSNGYGGQAPPPPVTVAPPTPAATPSIARYAKPP 197

  Fly   219 DVQKRELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKE 283
            .:..                         ||:|:...:...::...:....:...|..:..|:..
  Fly   198 ALMM-------------------------NSAGEMPIKPAPKMPPSMGHGHSHGLNPNVSGLDLS 237

  Fly   284 FERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQRRSA-------------DT 335
            :...|                     :.|..|....:..:..::.|..::             ..
  Fly   238 YSALH---------------------KHWLWNPSLLYYTQAHIQAQAAASGGQFLPYAGGYLPHA 281

  Fly   336 VDGSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAINVAE--RTSSALVS----------NSLP 388
            :..:..:||:.....|.:.||:   :.||||....|::..:  ::|.|.:|          .|.|
  Fly   282 MAAAAASSTSALGGFTKSESSI---DLSTPGAAGDALSDCDSGKSSPAALSLTASGGGNGAGSAP 343

  Fly   389 EASNGPTVLGGEANTTHTSSESP-----PLQPAAPRLPLNSG------FNTMYSSIPQPIATMAE 442
            |||.|.|:       :|:...:|     .|:....||.|:|.      .::..||...|:|...|
  Fly   344 EASPGSTL-------SHSRKRNPYSIEELLKKPEKRLRLDSNRLECLESSSCESSQDSPVAPPLE 401

  Fly   443  442
              Fly   402  401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 77/124 (62%)
COG5576 <253..368 CDD:227863 15/127 (12%)
Homeobox 269..322 CDD:395001 5/52 (10%)
PoxnNP_001261016.1 HTH 5..133 CDD:304362 80/127 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.