DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and Zasp52

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster


Alignment Length:544 Identity:117/544 - (21%)
Similarity:179/544 - (32%) Gaps:140/544 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 CSTAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDI--------------SRILQVSN 75
            ||.......|:|     |..|.||.||...     .|..|..:              |.||.||.
  Fly  1539 CSATHARNYNEL-----NASPFPDRTRSPA-----PGPPPNPLNAIRAPRMKEPETKSNILSVSG 1593

  Fly    76 GCVSKILGRYYETGSIKPRAIGGSKPRVATTPVV-------QKIADYKRECPSIF-AWEIRDRLL 132
            |                        ||:.|..:.       |.:|..::...|.. ::..:...:
  Fly  1594 G------------------------PRLQTGSITTGQSYQGQLLAHSEQSSQSASQSYNQQPERI 1634

  Fly   133 SEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQNESVYEKLRMFNGQTGGWAWYPSNTTTAHLT 197
            :||        .|.::|...|..:||.:||||.|.:|      ....|.|..........|....
  Fly  1635 TEQ--------RVGNLNIQQREQSSQLQQQAQSQTQS------QTRSQVGNTQIERRRKVTEEFE 1685

  Fly   198 LPPAASVVTSPANLSGQADRDDVQKREL-QFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRL 261
            ...:|..:..... |....:...|.:.: |...:....:.:.|.::..|.:..:|...||.:   
  Fly  1686 RTQSAKTIEIRTG-SQSVSQSKAQSQSISQAQTQAQSQSQNQSDTERRSSYGKTGFVASQAK--- 1746

  Fly   262 KRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREE-- 324
                   |.|...|:|.||..:.:.     :.||.....:...|..|...:.|....|....|  
  Fly  1747 -------RLSCMEEEISSLTSQSQA-----ISARASALGEGCFPNLRSPTFDSKFPLKPAPAESI 1799

  Fly   325 -----------KMRT-------------QRRSADTVDGSG-RTSTANNPSGTTASSSVATSNNST 364
                       ||.|             |:|||    .|| :.:|::....:.||||.||    |
  Fly  1800 VPGYATVPAATKMLTAPPPGFLQQQQQQQQRSA----FSGYQATTSSVQQSSFASSSKAT----T 1856

  Fly   365 PGIVNSAINVAERTSSALVSNSLPEASNGPTVLGGEANTTHTSSESPPLQPAAPRLPLNSGFNTM 429
            ..:.:|:.:.:...|.|..|.||.:||...|....:|.|.:.||.....:|.....|        
  Fly  1857 SSLSSSSASASASASVARSSQSLTQASAITTTTNNQATTAYRSSNGSITKPNLASRP-------- 1913

  Fly   430 YSSIPQPIATMAENYNSSLGSMTPSCLQQRDAYPYMFHDPLSLGSPYVSAHHRNTACNPSAAHQQ 494
                  .||::....::|..:..||....:...|  |..|:...|  |.|:..|.|..|:.|...
  Fly  1914 ------SIASITAPGSASAPAPVPSAAPTKATAP--FKAPIVPKS--VIANAVNAAAPPAPAVFP 1968

  Fly   495 PPQHGVYTNSSPMPSSNTGVISAG 518
            |....:..||:...|...|..|||
  Fly  1969 PDLSDLNLNSNVDNSPGAGGKSAG 1992

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 26/145 (18%)
COG5576 <253..368 CDD:227863 32/141 (23%)
Homeobox 269..322 CDD:395001 12/52 (23%)
Zasp52NP_001027420.2 PDZ_signaling 6..87 CDD:238492
DUF4749 150..>217 CDD:292558
LIM_ALP_like 282..333 CDD:188746
LIM1_Enigma_like_1 2020..2073 CDD:188839
LIM 2081..2132 CDD:259829
LIM3_Enigma_like_1 2140..2193 CDD:188845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
11.030

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