DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and prd

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster


Alignment Length:587 Identity:195/587 - (33%)
Similarity:276/587 - (47%) Gaps:150/587 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GQSTLFGCSTAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKIL 82
            |.||:...: :|...:||||||::||||||::.|.||||:|..|.|||.|||.|:||:|||||||
  Fly    17 GYSTMQDMN-SGQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKIL 80

  Fly    83 GRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIPSVSS 147
            .||.|||||:|..|||||||:||..:..:|.:|||..|.:|:||||::|:.|.||:....||||:
  Fly    81 NRYQETGSIRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSA 145

  Fly   148 INRVLRNLASQKEQQAQQQNESVYEKLRMFNGQTGGWAWYPSNTTTAHLTLPPAASVVTSPANLS 212
            |:|::|.      :.|...|:                                .:|...|||...
  Fly   146 ISRLVRG------RDAPLDND--------------------------------MSSASGSPAGDG 172

  Fly   213 GQADRDDVQKRELQFSVEVSHTNSHDSTSDGNSEHNSSG---DED-----SQMRLRLKRKLQRNR 269
            .:|                    |....||.:..|:::|   |||     |:..:.||||.:|.|
  Fly   173 TKA--------------------SSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRCR 217

  Fly   270 TSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQRRSAD 334
            |:||..|:|.||:.||||.|||::.||.||.:..|.|||||||||||||:.|::.         .
  Fly   218 TTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQH---------T 273

  Fly   335 TVDGSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALVSNSLPEASNGPTV--- 396
            :|.|..       |.|..||.|...:::|.|.:|:|..::|   ..|::..||..|    ||   
  Fly   274 SVSGGA-------PGGAAASVSHVAASSSLPSVVSSVPSMA---PLAMMPGSLDPA----TVYQQ 324

  Fly   397 ----LGGEANTTHTSS---ESPPLQPAAPRLP------LNSGFNTMYSSIPQPIATMAENYNSS- 447
                .|..||.:.:::   .|..|.|.....|      .|...||....:|      .||.|:: 
  Fly   325 QYDFYGSHANISVSAAAPMASSNLSPGITTTPPHHHQFYNPSANTASYIMP------GENGNTTP 383

  Fly   448 LGSMTPSCLQQRDAYPYMFHDPLSLGSPY---VSAHH---RNTACNP--SAAHQQPPQHGVYTNS 504
            .|::..|..:.:            |||.|   ...|.   ||.:.|.  |:|..|.|        
  Fly   384 TGNIIVSSYETQ------------LGSVYGTETETHQTMPRNESPNESVSSAFGQLP-------- 428

  Fly   505 SPMPSSNTGVIS-AGVSVPVQISTQNVSDLTGSNYWPRLQXSSIFGSPLDHLSKATAAAIIAAQA 568
             |.|:|.:.|:| |||       |.:....:|::....|..:|.....|....|..:..:|||..
  Fly   429 -PTPNSLSAVVSGAGV-------TSSSGANSGADPSQSLANASAGSEELSAALKVESVDLIAASQ 485

  Fly   569 AE 570
            ::
  Fly   486 SQ 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 73/123 (59%)
COG5576 <253..368 CDD:227863 51/119 (43%)
Homeobox 269..322 CDD:395001 33/52 (63%)
prdNP_723721.1 PAX 27..154 CDD:238076 74/132 (56%)
Homeobox 217..269 CDD:278475 33/51 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 1 0.900 - - E1_KOG0849
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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