DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and oc

DIOPT Version :10

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster


Alignment Length:414 Identity:111/414 - (26%)
Similarity:160/414 - (38%) Gaps:124/414 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 RKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMR 327
            ||.:|.||:|:..|:|.||..|.:|.|||:|.||.:|.||.|||:|:||||.|||||.|::.:.:
  Fly    65 RKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQ 129

  Fly   328 TQRRSADTV-----DGSGR---TSTANNPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALVS 384
            .|..|..:.     .|||.   :|:||:.|.:..:.|.:.:|..:.|..||      ..||....
  Fly   130 QQSNSLSSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNS------NKSSQKQG 188

  Fly   385 NSLPEASNGPTVLGGEANTTHTSSESPPLQPAAPRLPLNSGFNTMYSSIPQPIATMA-------- 441
            ||......|.:..|..:|....::.:    .||..:.......|.:||.....|..|        
  Fly   189 NSQSSQQGGGSSGGNNSNNNSAAAAA----SAAAAVAAAQSIKTHHSSFLSAAAAAASGGTNQSA 249

  Fly   442 --ENYNSSLGSMTPSCLQQRDAYPYMFHDPLSLGSPYVSAHHRNTACNPSAAHQQPPQHGVYTNS 504
              .:.|::.|:.||:.........       |....::||.....|.|.:||||         ||
  Fly   250 NNNSNNNNQGNSTPNSSSSGGGGG-------SQAGGHLSAAAAAAALNVTAAHQ---------NS 298

  Fly   505 SP-MPSSNTGV-----------------------------------ISAGVSVPVQISTQNVSDL 533
            || :|:..|.|                                   :..||.|.|.:......||
  Fly   299 SPLLPTPATSVSPVSIVCKKEHLSGGYGSSVGGGGGGGGASSGGLNLGVGVGVGVGVGVGVSQDL 363

  Fly   534 TGSNYWPRLQXS------------SIFGS----------------PLDHLSKAT----------- 559
            ..|.| .:|:.:            ||:||                |:|..|..|           
  Fly   364 LRSPY-DQLKDAGGDIGAGVHHHHSIYGSAAGSNPRLLQPGGNITPMDSSSSITTPSPPITPMSP 427

  Fly   560 ---AAAIIAAQAAEKSHKHRKEHS 580
               |||..|||:|:.:| |...||
  Fly   428 QSAAAAAHAAQSAQSAH-HSAAHS 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645
COG5576 <253..368 CDD:227863 47/112 (42%)
Homeodomain 267..322 CDD:459649 32/54 (59%)
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 32/54 (59%)
Blue background indicates that the domain is not in the aligned region.

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