Protein Alignment toy and Hoxc5

DIOPT Version :9

• Sequence 1: NP_001368990.1
• Gene: toy / 43833
• FlyBaseID: FBgn0019650
• Length: 655
• Species: Drosophila melanogaster
• Sequence 2: NP_001101586.1
• Gene: Hoxc5 / 315341
• RGDID: 1307584
• Length: 222
• Species: Rattus norvegicus
• Alignment Length: 245
• Identity: 58/245 - (23%)
• Similarity: 92/245 - (37%)
• Gaps: 73/245 - (29%)

  Fly   132 LSEQVCN-----SDNIPSVSSINRVLRNLASQKEQQAQQQNESVYEKLRMFNGQTGGWAWYPSNT 191
            :|..|.|     |.|||:.:.  :...|..|..|.||.:......:....|....      |||:
  Rat     1 MSSYVANSFYKQSPNIPAYNM--QTCGNYGSASEVQASRYCYGGLDLSITFPPPA------PSNS 57

  Fly   192 ---------TTAHLTLP--PAASVVTSPANLSG--------------QADRDDVQKRELQFSVEV 231
                     ..||   |  ||.|...:|.:..|              :|.|..:::| .:.|.|:
  Rat    58 LHGVDMAANPRAH---PDRPACSAAAAPGHALGRDEAAPLNPGMYSQKAARPALEER-AKSSGEI 118

  Fly   232 SHTNSHDSTSDGNSE-----------------HNSSGDEDSQMRLRLKRKLQRNRTSFSNEQIDS 279
            ....:......|.|:                 |.:.|              :|:|||::..|...
  Rat   119 KEEQAQTGQPAGLSQPPAPPQIYPWMTKLHMSHETDG--------------KRSRTSYTRYQTLE 169

  Fly   280 LEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQ 329
            |||||....|.....|..:|:.:.|.|.:|::||.|||.||:::.||:::
  Rat   170 LEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKSK 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
toy	NP_001368990.1	PAX	29..153	CDD:128645	7/25 (28%)
		COG5576	<253..368	CDD:227863	25/77 (32%)
		Homeobox	269..322	CDD:395001	22/52 (42%)
Hoxc5	NP_001101586.1	COG5373	65..>142	CDD:227665	15/80 (19%)
		Homeobox	158..212	CDD:395001	22/53 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910