DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and otx2b

DIOPT Version :10

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_571326.1 Gene:otx2b / 30501 ZFINID:ZDB-GENE-980526-406 Length:289 Species:Danio rerio


Alignment Length:228 Identity:69/228 - (30%)
Similarity:114/228 - (50%) Gaps:32/228 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 RKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMR 327
            ||.:|.||:|:..|:|.||..|.:|.|||:|.||.:|.||.|||:|:||||.|||||.|::::.:
Zfish    36 RKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQ 100

  Fly   328 ----------TQRRSADTVDGSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAINVAE-----R 377
                      .:::|:...:.|..:..:...:..:::|..|.|..:.|..:.|..:::.     .
Zfish   101 QNGGQNKVRPAKKKSSPAREASSESGASGQFTPPSSTSVPAISTTTAPVSIWSPASISPLSDPLS 165

  Fly   378 TSSALVSNSLP----EASN------GPT-VLGG-EANTTHTSSESPPLQPAAPRLPLNSGFNTMY 430
            |||:.:..|.|    :||.      |.| ..|| :..:..|........|.:...|::|  |.:.
Zfish   166 TSSSCMQRSYPMTYTQASGYSQGYAGSTSYFGGMDCGSYLTPMHHQLTGPGSTLSPMSS--NAVT 228

  Fly   431 SSIPQ-PIATMAENYNSS-LG-SMTPSCLQQRD 460
            |.:.| |.:...:.|.:| || :.|..||..:|
Zfish   229 SHLNQSPASLPTQGYGASGLGFNSTADCLDYKD 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645
COG5576 <253..368 CDD:227863 41/114 (36%)
Homeodomain 267..322 CDD:459649 32/54 (59%)
otx2bNP_571326.1 Homeodomain 39..94 CDD:459649 32/54 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..142 4/48 (8%)
TF_Otx 153..234 CDD:427350 18/82 (22%)
Blue background indicates that the domain is not in the aligned region.

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