DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and hoxb3a

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_571192.2 Gene:hoxb3a / 30339 ZFINID:ZDB-GENE-990415-104 Length:417 Species:Danio rerio


Alignment Length:532 Identity:117/532 - (21%)
Similarity:183/532 - (34%) Gaps:188/532 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 STLFGCSTAGHS--GINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKIL 82
            |||||    |:|  |.|..|  |       |:........||                      |
Zfish    10 STLFG----GYSYQGANGFG--Y-------DAPAPAFQNSAH----------------------L 39

  Fly    83 GRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSE-----QVCNSDNI 142
            ...|:..:...:::|.|.|   ..|...|..:....|       :|..|..|     ||....|.
Zfish    40 EGDYQRSACSLQSLGTSAP---PQPQHAKTKELNGSC-------MRPSLPPEHHPPPQVSPPQNT 94

  Fly   143 PSVSSINRVLRNLASQKEQQAQQQNESVYEKLRMFNGQTGGWAWYPSNTTTAHLTLPPAASVVTS 207
            .:|::.|             |.||           .|.:||.....|..|:.  :...::|:.|:
Zfish    95 VNVAATN-------------ATQQ-----------PGGSGGGGVAGSGGTSK--SSSKSSSMATN 133

  Fly   208 PANLSGQ------ADRDDVQKRELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKLQ 266
            | .|:.|      ..|.:.:::           ||..|.|..|:|  |||.|.|.......:   
Zfish   134 P-TLTKQIFPWMKESRQNTKQK-----------NSSPSASSANAE--SSGGEKSPPGSAASK--- 181

  Fly   267 RNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQRR 331
            |.||::::.|:..|||||....|.....|..:|:.:.|.|.:|::||.|||.|:::::|.:    
Zfish   182 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSK---- 242

  Fly   332 SADTVDGSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALVSNSLPEASNGPTV 396
                  |.|.:|...:|:|                                 |..||..|:    
Zfish   243 ------GIGSSSGGPSPTG---------------------------------SPPLPMQSS---- 264

  Fly   397 LGGEANTTHT----SSESPPL--QPAAPRLPLNSGF-NTMYSSIPQPIATMAENYNSSLGSMTPS 454
             .|..|:.|:    .:.|||.  :|......:::.: |.|....||      :.|.::.....|.
Zfish   265 -AGFMNSMHSMGSYDAPSPPSFNKPHQNAYAMSTAYQNPMKGCPPQ------QKYGNTPPDYDPH 322

  Fly   455 CLQQRD---AYPYMFHDPLSLGSPYVSA---------------HHRNTACNPSAA-------HQQ 494
            .||...   ..|.|...|:.:|..||.|               ||::.:.:.:.|       |..
Zfish   323 GLQGNSGNYGTPNMQGSPVYVGGNYVDAMPATGPSMYGLNHLPHHQSASMDYNGATQMSANQHHG 387

  Fly   495 P-PQHGVYTNSS 505
            | ..|..||:.|
Zfish   388 PCDPHPTYTDLS 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 25/130 (19%)
COG5576 <253..368 CDD:227863 29/114 (25%)
Homeobox 269..322 CDD:395001 20/52 (38%)
hoxb3aNP_571192.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..135 25/120 (21%)
Antp-type hexapeptide 140..145 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..184 13/52 (25%)
Homeobox 184..236 CDD:278475 20/51 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..290 17/100 (17%)
DUF4074 353..415 CDD:290032 9/47 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..417 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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