DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and Mixl1

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001099449.1 Gene:Mixl1 / 289311 RGDID:1310011 Length:231 Species:Rattus norvegicus


Alignment Length:189 Identity:61/189 - (32%)
Similarity:82/189 - (43%) Gaps:49/189 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 QRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQR 330
            :|.|||||:||:..||..|.:|.|||:..|||||....|||:||||||.|||||.||:.....|.
  Rat    87 RRKRTSFSSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSGKSFQP 151

  Fly   331 RSADTVDGSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALVSNSLPEASNGPT 395
            .|      |.|....:.|:               ||           |.:..:...||.      
  Rat   152 LS------SRREDFLHRPA---------------PG-----------TEARCLKPQLPL------ 178

  Fly   396 VLGGEANTTHTSSESPPLQPAAPRLPLNSGFNTMYSSIPQPIATMAENYN----SSLGS 450
                ||:..|....|  :.........:.||.| |||:.:.|.:..:::.    |:|||
  Rat   179 ----EADVNHVLDSS--MAGGGVCTSGSQGFET-YSSLSEDIGSKLDSWEEHIFSALGS 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645
COG5576 <253..368 CDD:227863 43/101 (43%)
Homeobox 269..322 CDD:395001 33/52 (63%)
Mixl1NP_001099449.1 PRK14971 <2..139 CDD:237874 31/51 (61%)
Homeobox 89..143 CDD:395001 33/53 (62%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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