DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and Prop1

DIOPT Version :10

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_705891.1 Gene:Prop1 / 266738 RGDID:628759 Length:223 Species:Rattus norvegicus


Alignment Length:246 Identity:69/246 - (28%)
Similarity:91/246 - (36%) Gaps:92/246 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 QRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQR 330
            :|:||:|:..|:..||..|.|..|||::.||.||...||.||||||||.|||||.|::|:...| 
  Rat    67 RRHRTTFNPAQLGQLESAFGRNQYPDIWVREGLAQDTGLSEARIQVWFQNRRAKQRKQERSLLQ- 130

  Fly   331 RSADTVDGSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALVSNSLPEASNGPT 395
                                .||..|.||                       .|..|.|:|..| 
  Rat   131 --------------------PTAHLSPAT-----------------------FSGFLSESSPYP- 151

  Fly   396 VLGGEANTTHTSSESPPLQPAAPRLPLNSGFNTMYSSIPQPIATMAENYNSSLGSMT-PSCLQQR 459
                     :|.:..||..|..|. |.|       .::|....|.|        |:| |:  |..
  Rat   152 ---------YTYTTPPPPVPCFPH-PYN-------HALPSQPCTGA--------SLTLPA--QPE 189

  Fly   460 DAYPYMFHDPLSLGSPYVSAHHRNTACNPSAAHQQPPQHGVYTNSSPMPSS 510
            |.||.:.           ..|..:.||        ||...:::.|...|.|
  Rat   190 DWYPTLH-----------PTHTGHLAC--------PPPPPMFSLSLETPKS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645
COG5576 <253..368 CDD:227863 39/101 (39%)
Homeodomain 267..322 CDD:459649 31/54 (57%)
Prop1NP_705891.1 Homeodomain 67..123 CDD:459649 31/55 (56%)
Blue background indicates that the domain is not in the aligned region.

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