DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and phx1

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_593776.1 Gene:phx1 / 2542405 PomBaseID:SPAC32A11.03c Length:942 Species:Schizosaccharomyces pombe


Alignment Length:613 Identity:127/613 - (20%)
Similarity:220/613 - (35%) Gaps:156/613 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRY------------YETGSIKPR 94
            ||..:.|:       :.:|..||..:...|.:||..:...||::            ||. .::..
pombe     9 NGGQINDN-------INYSEKRPTMLPENLSLSNYDMDSFLGQFPSDNNMQLPHSTYEQ-HLQGE 65

  Fly    95 AIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQK 159
            ....:.|........:...|:|:|.|...|....|....:.| ||..:.:.|.:...:  :.|:.
pombe    66 QQNPTNPNYFPPEFDENKVDWKQEKPKPDAPSFADNNSFDNV-NSSKLTNPSPVQPNI--VKSES 127

  Fly   160 EQQAQQQNESVYEKLRMFNGQTGGWAWYPSNTTTAHLTLPPAASVVTSPANLSGQADRDDVQKRE 224
            |....:|||.|                             .|.||..:..|:             
pombe   128 EPANSKQNEVV-----------------------------EATSVEKAKENV------------- 150

  Fly   225 LQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHY 289
                       :|:|   |..|   ||...|..    |.|.||    .:.:|:..|.:||.:...
pombe   151 -----------AHES---GTPE---SGGSTSAP----KSKKQR----LTADQLAYLLREFSKDTN 190

  Fly   290 PDVFARERLADKIGLPEARIQVWFSNRRAK----WRREEKMR----TQRRSADTVDGSGRTSTAN 346
            |....||::..::.:||..:.:||.|||||    .||:|:.|    .::|..|:::.....:.|:
pombe   191 PPPAIREKIGRELNIPERSVTIWFQNRRAKSKLISRRQEEERQRILREQRELDSLNQKVSQAFAH 255

  Fly   347 NPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALVSNSLP-EASNGPTVLGGE------ANTT 404
            ....|:.:|.......:.....|:.:....|.:......|.| ::|..|.:...:      .::|
pombe   256 EVLSTSPTSPYVGGIAANRQYANTLLPKPTRKTGNFYMKSGPMQSSMEPCIAESDIPIRQSLSST 320

  Fly   405 HTSSESPPLQPAAPRLPLNSGFNTMYSSIPQPIATMAENYNSSLGSMTPSCLQQRDAYPYMFHDP 469
            :.:|.||...|.:.:...::   :.||:||..::..    |.:....:|         |..:..|
pombe   321 YYNSLSPNAVPVSSQRKYSA---SSYSAIPNAMSVS----NQAFDVESP---------PSSYATP 369

  Fly   470 LS---LGSPYVSAHHRNTACNPSA------AHQQPPQHGVYTNSSPM--PSSNTGVISAGVSVPV 523
            |:   :..|....:......:||:      .|.:|..   |..|.|:  |:..||.:... |.|.
pombe   370 LTGIRMPQPESDLYSYPREVSPSSGGYRMFGHSKPSS---YKASGPVRPPNMATGHMRTS-SEPT 430

  Fly   524 QISTQNV---SDLTGSNYWPRLQXS----SIFGSPLDHLSKATAAAIIAAQAAEKSHKHRKEHS- 580
            ...::..   ..|.....|.||:.|    ..|.||    .|...|.:|..|..:    :|.|:| 
pombe   431 SYDSEFYYFSCTLLVIGLWKRLRASPQDLMCFYSP----PKKLFAYLIQFQGIQ----YRIEYSF 487

  Fly   581 --IVSIHTTKRKKNPPSLKRQTTCCSSR 606
              |.|||..:.::  |.|...:...|||
pombe   488 FVIESIHVFRVEE--PLLNELSATASSR 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 24/122 (20%)
COG5576 <253..368 CDD:227863 30/122 (25%)
Homeobox 269..322 CDD:395001 16/56 (29%)
phx1NP_593776.1 COG5576 116..272 CDD:227863 47/224 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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