DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and npax-2

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_508396.3 Gene:npax-2 / 185967 WormBaseID:WBGene00018591 Length:233 Species:Caenorhabditis elegans


Alignment Length:169 Identity:62/169 - (36%)
Similarity:87/169 - (51%) Gaps:18/169 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SSVGQSTLFGCST---------------AGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARP 64
            |..|..:...||:               |..||.||||..|..|.||....|::||:|...|.:.
 Worm    68 SDSGSPSSLSCSSLDYDVPPPPQYEKDVARSSGRNQLGRTYSPGLPLSMCEREEIVKLFQGGWKI 132

  Fly    65 CDISRILQVSNGCVSKILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRD 129
            ||||:.|.|::.||||||.||.:|||:||:   .:|.....:|:|..:.||:.........|||:
 Worm   133 CDISKRLCVTHSCVSKILNRYRQTGSVKPK---DAKEGRTESPLVLAVRDYRSRLGMCRQSEIRE 194

  Fly   130 RLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQNE 168
            :|:.:.||..||.||.||||.:||.....|.::....:|
 Worm   195 QLIRDGVCTRDNAPSRSSINHILRTKLDIKRRKKSLADE 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 53/123 (43%)
COG5576 <253..368 CDD:227863
Homeobox 269..322 CDD:395001
npax-2NP_508396.3 PAX 97..218 CDD:128645 53/123 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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