DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and Pax8

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_035170.1 Gene:Pax8 / 18510 MGIID:97492 Length:457 Species:Mus musculus


Alignment Length:535 Identity:185/535 - (34%)
Similarity:247/535 - (46%) Gaps:139/535 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PHSSVGQSTLFGCSTAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGC 77
            ||:|:         .:||.|:|||||.:|||||||:..||:||:|||.|.|||||||.|:||:||
Mouse     2 PHNSI---------RSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGC 57

  Fly    78 VSKILGRYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNI 142
            ||||||||||||||:|..||||||:|||..||:||.||||:.|::||||||||||:|.||::|.:
Mouse    58 VSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTV 122

  Fly   143 PSVSSINRVLRNLASQKEQQAQQQNESVYEKLRMFNGQTGGWAWYPSNTTTAHLTLPPA-----A 202
            ||||||||::|.    |.||.             ||        .|.::..|..:|.|.     :
Mouse   123 PSVSSINRIIRT----KVQQP-------------FN--------LPMDSCVATKSLSPGHTLIPS 162

  Fly   203 SVVTSPAN--------------LSGQADRDDVQKRELQFSVEVSHTNSHDSTSDGNSEHNSSGDE 253
            |.||.|.:              |.|.|...:..||::..|.:.|...|.||.|      :|||  
Mouse   163 SAVTPPESPQSDSLGSTYSINGLLGIAQPGNDNKRKMDDSDQDSCRLSIDSQS------SSSG-- 219

  Fly   254 DSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRA 318
                    .||..|..| ||...:::||..|||.|||:.:|                   |....
Mouse   220 --------PRKHLRTDT-FSQHHLEALECPFERQHYPEAYA-------------------SPSHT 256

  Fly   319 KWRREEKMRTQRRSADTVDGSGRTSTANNPSGTTASS-----------SVATSNNSTPGIVNSAI 372
            |..:.........|| ..||....:::|.|.|...|:           |.......||.:.:|:.
Mouse   257 KGEQGLYPLPLLNSA-LDDGKATLTSSNTPLGRNLSTHQTYPVVADPHSPFAIKQETPELSSSSS 320

  Fly   373 NVAERTSSALVS-----------------NSLPEASNGPTVLGGEANTTHTSSESPPLQPAAPRL 420
            ..:..:|||.:.                 |:.|.|::......|:|..:......|.|....|.:
Mouse   321 TPSSLSSSAFLDLQQVGSGGPAGASVPPFNAFPHAASVYGQFTGQALLSGREMVGPTLPGYPPHI 385

  Fly   421 PLNSGFNTMYSSIPQPIATM--AENYNSSLGSMTPSCLQQRDAYPYMFHDPLS--LGSPYVSAHH 481
            | .||..:..||   .||.|  ...|:.:..|.||     ..:|...:..|.|  |.|||    :
Mouse   386 P-TSGQGSYASS---AIAGMVAGSEYSGNAYSHTP-----YSSYSEAWRFPNSSLLSSPY----Y 437

  Fly   482 RNTACNPSAAHQQPP 496
            .::...|||    ||
Mouse   438 YSSTSRPSA----PP 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 90/123 (73%)
COG5576 <253..368 CDD:227863 28/125 (22%)
Homeobox 269..322 CDD:395001 14/52 (27%)
Pax8NP_035170.1 PAX 9..133 CDD:128645 90/123 (73%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 12..68 42/55 (76%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 87..135 32/51 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..224 20/80 (25%)
Pax2_C 344..455 CDD:372091 32/122 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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