DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and Pax7

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_006538692.1 Gene:Pax7 / 18509 MGIID:97491 Length:505 Species:Mus musculus


Alignment Length:592 Identity:194/592 - (32%)
Similarity:267/592 - (45%) Gaps:158/592 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIKP 93
            |...:||||||::||||||:..|.||||:||.|.|||.|||.|:||:|||||||.||.|||||:|
Mouse    34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP 98

  Fly    94 RAIGGSKPR-VATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIPS--VSSINRVLRNL 155
            .|||||||| |||..|.:||.:||||.|.:|:||||||||.:..|:...:||  ||||:||||..
Mouse    99 GAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIK 163

  Fly   156 ASQKEQQAQQQNESVYEKLRMFNGQTGGWAWYPSNTTTAHLTLPPAASVVTSPANLSGQADRDDV 220
            ..:||                                                       |.::.
Mouse   164 FGKKE-------------------------------------------------------DDEEG 173

  Fly   221 QKRELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFE 285
            .|:|.....:..|:........||.....| |.:|:..|.||||.:|:||:|:.||::.|||.||
Mouse   174 DKKEEDGEKKAKHSIDGILGDKGNRLDEGS-DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFE 237

  Fly   286 RTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQRRSADTVDGSGRTSTANNPSG 350
            ||||||::.||.||.:..|.|||:|||||||||:||::                           
Mouse   238 RTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ--------------------------- 275

  Fly   351 TTASSSVATSNNSTPGIVNSAINVAERTSSALVSNSLPEASNGPTVL---GGEANTTHTSSESPP 412
             ..::.:|..|:..||      .........|....||:::...|.:   ||  :|.|.....||
Mouse   276 -AGANQLAAFNHLLPG------GFPPTGMPTLPPYQLPDSTYPTTTISQDGG--STVHRPQPLPP 331

  Fly   413 -------LQPAAPRLPLNSGFNTMYSSIPQPIATMAENYNSSLGSMTPSCLQQRDAYPYMFHDPL 470
                   |..||.....:|.:...:|         ..:|:.|.  |.|..       |....:|:
Mouse   332 STMHQGGLAAAAAAADTSSAYGARHS---------FSSYSDSF--MNPGA-------PSNHMNPV 378

  Fly   471 SLG-SPYVSAHHRNTACNPSAAHQQP-------PQHGVYTNSSPMPSS---NTGVISAGVSVPVQ 524
            |.| ||.|    .:...||||...||       |.||...::|.:.:|   ....|..|.|:|..
Mouse   379 SNGLSPQV----MSILSNPSAVPPQPQADFSISPLHGGLDSASSISASCSQRADSIKPGDSLPTS 439

  Fly   525 IS---------TQNVSDLTGSNYWPRLQXSSIFG-SPLDHLSKATAAAIIAAQAAEKSHKHRKEH 579
            .|         ..:|..:.|..|       |.:| :.:|:|:|..:   ::.|...|..:|....
Mouse   440 QSYCPPTYSTTGYSVDPVAGYQY-------SQYGQTAVDYLAKNVS---LSTQRRMKLGEHSAVL 494

  Fly   580 SIVSIHT 586
            .::.:.|
Mouse   495 GLLPVET 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645 82/126 (65%)
COG5576 <253..368 CDD:227863 46/114 (40%)
Homeobox 269..322 CDD:395001 34/52 (65%)
Pax7XP_006538692.1 PAX 34..161 CDD:128645 82/126 (65%)
Homeobox 220..274 CDD:365835 34/53 (64%)
Pax7 347..385 CDD:372070 11/55 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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